| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2163 |
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| Symbol | vacJ |
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| ID | 1045022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2469121 |
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| End bp | 2469828 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637145577 |
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| Product | VacJ family lipoprotein |
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| Protein accession | NP_744312 |
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| Protein GI | 26988887 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0344293 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.998273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTAGGA TCGGTGCCAG TGTGATCGAA CGAGTCACCC AGGCCTGTGT CTGCGCCAGC
TTGCTGCTGG CGCCCGCGGC AGCCACCCAG GCCGCCACCG AGGAAGATCC CTGGGAAGCG
GTCAACCGCC CGATCTTCCG CTTCAACGAC ACCCTCGACA CCTATGCCCT CAAACCATTG
GCCAAGGGCT ACCAGGCGGT CACTCCACAG TTCCTCGAAG ATGGCATCCA CAACATCTTT
CGCAACCTGG GGGACGTGAC CAACCTGGCC AACAACGTGT TGCAGCTCAA GCCGCATGCG
GCGGGCGTGG ATACGGCGCG GTTGATCGTC AACACCACCT TCGGCCTGGG TGGCTTCTTC
GATGTGGGTA CCAAGATGGG CCTGCAGCGC AACGACGAGG ACTTTGGCCA GACCTTGGGC
TACTGGGGTG TGCCGAGCGG GCCGTATGTG GTCATCCCGC TGCTGGGCCC AAGCACTGTG
CGTGATGGTG TGGCCAAGTA CCCGGACACC TACACCAAAC CCTATCGCTA CATCGACCAC
GTGCCTACGC GCAATTCGAT CTTCGCGCTG GACCTGATCG ACACCCGCGC CAGCCTGCTC
TCGGCCGAAA AGCTGATTCA GGGTGACAAG TACATCTTCA TTCGCAATGC CTACCTGCAA
AACCGCGAGT TCAAGGTGAA GGATGGCGAG GTCGAAGACG ACTTCTGA
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| Protein sequence | MRRIGASVIE RVTQACVCAS LLLAPAAATQ AATEEDPWEA VNRPIFRFND TLDTYALKPL
AKGYQAVTPQ FLEDGIHNIF RNLGDVTNLA NNVLQLKPHA AGVDTARLIV NTTFGLGGFF
DVGTKMGLQR NDEDFGQTLG YWGVPSGPYV VIPLLGPSTV RDGVAKYPDT YTKPYRYIDH
VPTRNSIFAL DLIDTRASLL SAEKLIQGDK YIFIRNAYLQ NREFKVKDGE VEDDF
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