| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1949 |
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| Symbol | |
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| ID | 1043110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2204821 |
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| End bp | 2206473 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637145354 |
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| Product | GMC family oxidoreductase |
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| Protein accession | NP_744101 |
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| Protein GI | 26988676 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0586145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000512241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGAGCGAGG AGCAGCCGGT GTACGACTAC ATAATCATTG GAGCGGGATC TGCCGGCTGT
GTTTTGGCAA ACCGGCTTTC TGCCAACCCA GAGCATTCAG TGCTACTGCT GGAAGCGGGT
TCACGGCCAA AGGGACTGTG GGCTTCGATG CCAGCAGGGG TGTCACGGGT CATCCTGCCT
GGGCCGACGA ATTGGGCGTA CCAATCTGAA CCCGATCCTA GCTTGGCAGG GCGGCGTATC
TATGTGCCTC GTGGAAAAGC ACTGGGTGGA TCGAGTGCGA TCAATGGGAT GGCTTATCTT
CGAGGCCATA GAGAGGACTA CGATCATTGG GTATCCCTAG GATGCGCTGG GTGGGGTTGG
GACGATGTCC TGCCTTTCTA CAAGAAATTT GAACATCGGG AGGAGGGTGA TGAAGCATTC
CGAGGCCGCG ATGGCGAGCT TTGGGTCACA GACCCGGTAT TCAAACATCC GTCCTCTCAG
GCGTTCATTG AGTCTTGTGT CGAAGCGGGA ATTCCTCGTC TGGACGATCT CAACGCTCCA
AGCCCTGAAG GCACCGGCTT CCTGCAATTC ACCATTAAAG GGGGGCGGCG GCACTCGGCG
GCCACTGCAT TCCTTCAGCC TGTACTGAAG CGCCCAAACC TGCATGTGTT GACGGGCGCG
CTCGTCCAAA AAATCGTTAT TGAGGCTGAG CGTGCCACCG GTGTCGAGTA CTCCCTGGGT
AATCAGTCCA TCTTTGCTGC GGCAAGGGAA ATTATCCTGT CTGCGGGGGC TATTGATTCC
CCGAAATTGC TCATGCTGTC CGGCGTTGGC CCTGCCCAGG AACTAACACG GCATGGCATA
CCGGTGCTCC GTGATCTGCC TGGTGTTGGG GAAAATCTTC ATGACCACGT CTACGTGCAC
TCTGGAATCG AAACAGACCG CGTCGCATCG CTGAACAAAG ATCTACGTGG CCTTCGTTCT
GTGCTCCAAG GGATGAACTA TCTGCTGAGG GGGAAAGGTT GCCTGACCAT GGGAGCCTCT
CAGGCAGTGG CCCTCGCTCA AGTACTCCCA GGAGCGCGTC GACCTGACAC CCAGATCAAC
TACCGCCCTC TGAGTTGGCA TTTCAACAAG CAGGGGTTGG TTGAAATCGG AAAAGATAAT
GCGGTCACCA TTTCCACCTG TCAGTTAAAC CCACTATCGC GTGGAAGATT GACGCTTAAA
TCCAGCAACC CTATAGACGC GCCAGCTATT TATCCAAACT ATTTTGGAAA TGAGCGCGAC
ATGGTCGCGG CAATTGCTGC GGTACGAAAA GTGCGAGAAA TTTCGTGTGT TGGACCTCTA
GCTAAACATA TCGTAAACAT TTCTCCGCCT GATTCGATGA GTGATGGAGA AATCGCTGAT
TACATCAGGC AAGAGGGTGC TAGCTCAATG ATGCACTGGG TAGGCTCGTG CAAAATGGGT
ATAGATTCTA TGGCAGTGGT CGACGAGCGC CTTAAGGTTC GGGGGCTCCA AGGGCTGCGT
GTTGTGGACG CCTCAATCAT GCCTACTATC ACCTCCGGCA ACACTAATGC GCCCACCATT
ATGATCGGTG AGAAAGGGGC GGCGATGATT TTGGAAGATC GACTCATAGG GCCAAGGAGA
AAGTTTAGAT CAGAAAGTGC GCGAGCAAAC TAG
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| Protein sequence | MSEEQPVYDY IIIGAGSAGC VLANRLSANP EHSVLLLEAG SRPKGLWASM PAGVSRVILP
GPTNWAYQSE PDPSLAGRRI YVPRGKALGG SSAINGMAYL RGHREDYDHW VSLGCAGWGW
DDVLPFYKKF EHREEGDEAF RGRDGELWVT DPVFKHPSSQ AFIESCVEAG IPRLDDLNAP
SPEGTGFLQF TIKGGRRHSA ATAFLQPVLK RPNLHVLTGA LVQKIVIEAE RATGVEYSLG
NQSIFAAARE IILSAGAIDS PKLLMLSGVG PAQELTRHGI PVLRDLPGVG ENLHDHVYVH
SGIETDRVAS LNKDLRGLRS VLQGMNYLLR GKGCLTMGAS QAVALAQVLP GARRPDTQIN
YRPLSWHFNK QGLVEIGKDN AVTISTCQLN PLSRGRLTLK SSNPIDAPAI YPNYFGNERD
MVAAIAAVRK VREISCVGPL AKHIVNISPP DSMSDGEIAD YIRQEGASSM MHWVGSCKMG
IDSMAVVDER LKVRGLQGLR VVDASIMPTI TSGNTNAPTI MIGEKGAAMI LEDRLIGPRR
KFRSESARAN
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