Gene PP_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1941 
Symbol 
ID1043119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2196384 
End bp2196986 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID637145346 
Producthypothetical protein 
Protein accessionNP_744093 
Protein GI26988668 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000561308 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCGAAAA AAGAGCAAAG AAAACCTGCC ACACTTCGTG CAGAGCAGCA GCAGGAAACG 
CGGGAAAAAC TGCTTCGGGC TACTATTGAA ACGATTAGCT ACAAAGGCTA CCAAAGCGCA
ACGATAGACA ACATCACCTC TCATGCAGGA ACAGGCCGAG CTACATTTTA TCTACATTTC
CGGAGTAAGC CCGAGGCATT GATGGCGGGA TGGCAGGAGA TATACATGCC ACAAATGGTT
AACATCCTTC AAAATCTTGA CGAATCATAC CCTGCTAAAG GCCAAAAATT AGAAGTGTGG
ATCTCCTCAC TCGTGAAGTT CTGGGAAGAC AGTAAGCCCA TTGCGCTAGC TTCGAATGAG
GCAATTGCAT TGGAGCCGCA ACTTTCTAGA GAGTGGTTCA GGCAAATATG GACAGTATCT
TCACAGCTCC CTAACTGGTC AGCACGAAAC GCGGAGGATC GAGCAGATGC CGAGCTTCGG
CTGTTCATGC TTGGTACGTT TACCGAGCAT GTCCTAATGA TGTGGCTAGG CGGATCGGCC
CCTATTACTC GCGAGCAGGT TTTGAAATCG TTGGCTGAGC AGTGGTCAAG AGAGTTTTCT
TAG
 
Protein sequence
MSKKEQRKPA TLRAEQQQET REKLLRATIE TISYKGYQSA TIDNITSHAG TGRATFYLHF 
RSKPEALMAG WQEIYMPQMV NILQNLDESY PAKGQKLEVW ISSLVKFWED SKPIALASNE
AIALEPQLSR EWFRQIWTVS SQLPNWSARN AEDRADAELR LFMLGTFTEH VLMMWLGGSA
PITREQVLKS LAEQWSREFS