| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1917 |
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| Symbol | pabC |
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| ID | 1043160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2160260 |
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| End bp | 2161075 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145324 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | NP_744071 |
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| Protein GI | 26988646 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.307364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000254306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCACAGCT GGATCGACGG CCAGCCGGCG ACTGCACTCA ACCTGCAGAA CCGCGGCCTG
GCCTATGGCG ATGGCCTGTT CGAAACCATC GCTGTGCGAG GCGCCCGGCC CAGCTTGCTG
GACGGCCACC TCGCACGCCT GGCACTGGGC TGCCAGCGCC TGGCGATCAA CGCCGATCTG
GCGCTGGTGC GCGACGAGCT GCTGCGCTAC GCCAGCCAGC TGGGTGAGGG TGTCGTCAAA
CTCATCCTTA CCCGTGGCGA TAGCCAGCGT GGCTATGCGC CAGCTGTCGA TGCAGCGCCG
CGGCGTATCC TGCAAGGCAG CCCATTACCC CGTTATCCTG TCGAGCATGC TGAGCATGGC
GTGCGTTTGT TCCCTTGCCA TACCCGGCTT GGGGAACAAC CACTGCTGGC CGGCCTCAAA
CACCTTAACC GCCTGGAGCA GGTGCTGGCC CGTGCCGAAT GGCAGGACAG CGACCATGCC
GAAGGCCTGA TGCGTGACGC GCAGGGCAGG GTGATCGAAG GGGTATACAG CAATCTGTTT
CTGGTGCGCG ATGGCGTGCT GCTTACCGCC GACCTTAGCC GTTGTGGCGT GGCGGGCGTG
ATGCGTGCCG CACTGCTGGA ACAGGCCCCG CTGCTGGGTA TTGCGGTACA GGTCTGCGAC
CTGTCGTTCG AGGCGCTGGA GCAAGCGAAT GAAGTATTTG TTTGCAATAG CGTTTACGGC
ATTTGGCCCG TGCGTGGCGT AGCCGCGCTA AACTGGTCGC CGGGCCCGCT CACTCGTAAA
CTGCAGGCCG TTGCCCGTAC GTTACTGGAA ACCTGA
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| Protein sequence | MHSWIDGQPA TALNLQNRGL AYGDGLFETI AVRGARPSLL DGHLARLALG CQRLAINADL
ALVRDELLRY ASQLGEGVVK LILTRGDSQR GYAPAVDAAP RRILQGSPLP RYPVEHAEHG
VRLFPCHTRL GEQPLLAGLK HLNRLEQVLA RAEWQDSDHA EGLMRDAQGR VIEGVYSNLF
LVRDGVLLTA DLSRCGVAGV MRAALLEQAP LLGIAVQVCD LSFEALEQAN EVFVCNSVYG
IWPVRGVAAL NWSPGPLTRK LQAVARTLLE T
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