| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1888 |
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| Symbol | |
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| ID | 1043202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2128549 |
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| End bp | 2129643 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145296 |
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| Product | fimbrial protein |
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| Protein accession | NP_744043 |
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| Protein GI | 26988618 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0436738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00532877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACA TCAACAAGAC CCTTTTCCAG GCGCTGCTCG CCACTCTGGC ATGGCCGGCT
GCAAACGCCA TGGCCATGCC GGTAGACCAG ACCCGCTGCG AGTTCGAACA GCTGACCAGC
GCAAACCTCA AGGTCCATGT CCGCGACCTG AACACCCTTT ATGTGCCACG CGATGCGCGG
ATCGGCACAA CGATCGGCAC CCCAGAGCTG TTCGAAGCCA CTCTCGACCA GAACAACCTT
GCCCTCCTGT GCCGGACCTA CGGCGAGCGG ATAAATTTCA ACTTCCAGGC CGCCCGCGGG
GTACATCCTC CCCTGCCTGC GGTTGATGGG CGCTTCCTCG ACGCACCCGT CCTCAGGACC
AACATTCCAG GCATCGGAGC GATCGTAGAG TTGCTGCACC CCTTCCTCGG TGGCACCGAC
CAGTTCATTC CCGACAGCAG GCCACCCAGA GTGCCGTTCA CGGCCTATTA CGAGCAGACC
CTTTTGGGCC CGGCCACGCT AGCCACGTTC AGGCACAGGA TCACGCTGGT CAAGACCGGC
GATCTGCCGC CCGGCGAGCA TCAGCTGGAT GGCGTACTGG TGACCGGCCA TCTGGACTGG
GGAGGCTTTG GCAAAGTTCT GGAATACACC CTCAGGGCAA TGGTCATCCA GACCCAGTGC
GATGCTTCAG CAGACGTCAG TGCCAACCCG GTGGACCTCG GCGAATGGAG CGTCAACGAC
TTCACCGGCC CAGGCTTCAC CACGCCTCCT GCAGCATTCC AGGTCCGCTT GAGCAACTGC
CAGGTGGACC CTGACCCGGG TAACGAAACG CTCGCTACCA TCGAACTCGA TGGCATCAAT
GGTTCTCGAC CGATTGGCCC TGCAGATGAA AATGTGTTCA GCCTGACCGA CGACTCCGCA
GCCCGTGGCA TAGGTATTCA GATGCTGTAC AACGGGGTAT CGATGCCCCT GAACAAAGAG
ATCGACCTGG TACCCCTGAC GAGCGATAAC GTGCCTTTGA ATTTTCAGGC CCGCTTCTTC
CAGACAGAAC CCAACAGCAG CCTGCGCACG GGCTTGGCCA AGGGTGCCTT GAACTTCACC
ATTCGCTACC GCTGA
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| Protein sequence | MKNINKTLFQ ALLATLAWPA ANAMAMPVDQ TRCEFEQLTS ANLKVHVRDL NTLYVPRDAR
IGTTIGTPEL FEATLDQNNL ALLCRTYGER INFNFQAARG VHPPLPAVDG RFLDAPVLRT
NIPGIGAIVE LLHPFLGGTD QFIPDSRPPR VPFTAYYEQT LLGPATLATF RHRITLVKTG
DLPPGEHQLD GVLVTGHLDW GGFGKVLEYT LRAMVIQTQC DASADVSANP VDLGEWSVND
FTGPGFTTPP AAFQVRLSNC QVDPDPGNET LATIELDGIN GSRPIGPADE NVFSLTDDSA
ARGIGIQMLY NGVSMPLNKE IDLVPLTSDN VPLNFQARFF QTEPNSSLRT GLAKGALNFT
IRYR
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