Gene PP_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1883 
Symbol 
ID1043209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2114376 
End bp2116283 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content59% 
IMG OID637145291 
Producthypothetical protein 
Protein accessionNP_744038 
Protein GI26988613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.393139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.366802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGACAC CTATCAGTTT TGCCAGGTGT TCAGGTTCCG GGGCGGTGTT ATATCTATGC 
CAACTCTCGA ATCGGAAATG TGCAAGGCGG AGATATTCAT ACATGGACAT GCCAGACGTT
TCACACCTTA ATGAACGTAT GAACTCTGTC GACCTGGACG CGCTTGGCAG TGCCGATCTG
ATGACTTGGA TTAGCTATCC CGGCATCGCC GAACACGACC TGATATATAT CAACTGGCGG
GGGTGCAAGG CCGACAACAG TGCCGAGGAC CTCTTTGGCG AACGCGAAGT ATTGAGCCTG
GATGCTGGCC GCGGGGAGAT CCTGATCGAT AACGCACTCG TCACTGCCTT GCGCGGTGGC
CAGGTGTTCT ATTCGTTCAC GCGTCTGGAC AACGCCGGCA ATCCTGTGGG GCCTGAGTCC
AAGCGTCGTT TCTTCTTCGT TGACCGGCCC GCTGAAGGCA TATGGGCTTT GCCGGTTGCC
CACTTTCAAG ATGCCCATGA GGGGGTGATC GACGTCAACC TGCTCAATCC CGAAGGCATA
TTGCTGGCAA CAGCGCCCTA TGCCGCCATG GCCAAAGATG ACAAGGTTTT CCTGAGTTGG
GAGCCCTGGC TCAACGAGTC CTTGCCAGGT GTGCCGTTCG AGCAAGTACT GGAAGTGCAG
GAGTCTGATC CTGGCCGACC ACTGCTGTGG CACCTGGATA TCGGCCAGGT CTTCATGTAT
CTCGGCGGCT TCGCCTTTTT GCACTATCGC ATCGAATTCG CCGATGGCAC CAGCAGCCGG
TCGCCAGTGC AGCGCTTCGA CATCGTTTCG CCCGCCGCCG GCGACCCACC GCCGGCACCT
TTGCTGGCGG CGCCACGTAT CCCCGGGGCG ACGGATGGCG CGCTGGATCC TGATGACGAA
ACCTATCGCG CCGGCCTTCT GGTGGAGGTG GACCCCTATC CGGAGCTGGA ATTGGGCGAT
TCGCTGGTGC TCTATGCCGT AGGGCCGGAG GTGACGCTGC GCAGCCTGCG TGTGGATGCG
AGTTCGGTGG ACAGCAAACG CTTGACCTTC CACCTGGAGC GGGAGTGGCT GCAGAGCGAG
GTCAACCGCG GCAAGCGGTT CGCGTTCAGC TATGAGTTTT CGCGTCAGGG CGCGCAGAGG
CGCTCCCAAG TGCTGGATCT GGTCTTGCAG CGCAAGCTTT ACCTGCCTTT ACCGATAATC
CCGGACGCCA CGCAGGAAGA CGGTGACGCG TCGTACCAGG GCGTGGTCCA TCCAAGCAGG
CTGGAGTCTG GCGCCAAAGT GCGAATCCCG GCAGAGGCCG AGCTGGGTGA TGGCGCGGAG
CCTGCGCCGA CCGTCAACCT GCATTGGGAA GGGCACGGCA GCACGGGGGC AGCCATCGTT
CCCCGGCCGC CGTCAGGTGA CACACGCCTG TTCACGGTGC CGCGGTCGGC CATGGCCGCC
AATCTGGGTA GACGTCTGTG GGTGTACTAC ACCGTCACCC GCGCCGGCGA AACGCCACGC
ACATCAGAAA AGTTCGAGCT GCGGGTAAGC GATTTCGATC AGCGCAGCTA CCCGATAATT
CAGGTCGAAG GTGCCGAGAA CCGGGAATTG AAACTGCATG AGGTTCCAGT GGGTGGCGCT
TTGTGCACGC TGCCTTTTTG GACGTTCATG GCAGAAGGGC AATTGCTGGG TATCGAGGCG
CTAGGCCGTT CGGCATCTGG CCAGGATGTC ACGCATATTC TGCGCCCCCC CACCGAGGCG
GTGACATACG ACGAATATTC TGATGGCGTT ATTAAAGCCT ACCTGCCCAA ACAGTTTCTC
GGGAACTTGG ACTTAGGCAA AGATTTCAGA TTGACCGTAT CTGCAAGTTT CGATGACGGC
GAAACCTGGC GGGCATTTCC AATCGTTGAT CTTAAGCTGG TTTCTTAA
 
Protein sequence
MLTPISFARC SGSGAVLYLC QLSNRKCARR RYSYMDMPDV SHLNERMNSV DLDALGSADL 
MTWISYPGIA EHDLIYINWR GCKADNSAED LFGEREVLSL DAGRGEILID NALVTALRGG
QVFYSFTRLD NAGNPVGPES KRRFFFVDRP AEGIWALPVA HFQDAHEGVI DVNLLNPEGI
LLATAPYAAM AKDDKVFLSW EPWLNESLPG VPFEQVLEVQ ESDPGRPLLW HLDIGQVFMY
LGGFAFLHYR IEFADGTSSR SPVQRFDIVS PAAGDPPPAP LLAAPRIPGA TDGALDPDDE
TYRAGLLVEV DPYPELELGD SLVLYAVGPE VTLRSLRVDA SSVDSKRLTF HLEREWLQSE
VNRGKRFAFS YEFSRQGAQR RSQVLDLVLQ RKLYLPLPII PDATQEDGDA SYQGVVHPSR
LESGAKVRIP AEAELGDGAE PAPTVNLHWE GHGSTGAAIV PRPPSGDTRL FTVPRSAMAA
NLGRRLWVYY TVTRAGETPR TSEKFELRVS DFDQRSYPII QVEGAENREL KLHEVPVGGA
LCTLPFWTFM AEGQLLGIEA LGRSASGQDV THILRPPTEA VTYDEYSDGV IKAYLPKQFL
GNLDLGKDFR LTVSASFDDG ETWRAFPIVD LKLVS