| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1789 |
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| Symbol | |
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| ID | 1043315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2005983 |
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| End bp | 2006666 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637145192 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_743945 |
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| Protein GI | 26988520 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0065723 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAATA TTAAATCGAA TCTAGGCGAC TACGCCACCC TGGTTTTTGA CTGCGACGGT
GTGCTGCTAG ATTCGAATAA GGTGAAAACC CAAGCCTTCT ACGAAGCAGC GCTGCCTTAC
GGCGAAATGG CCGCCCAAGC TCTCGCTGAT CATCACGTTG CTAATGGCGG GATTTCACGC
TATAAAAAGT TTTCATATTT CTTAGAACAC ATAGTCGCCC AACACGCTGA AGGACCTTCA
TTAGAGCACC TTCTAGACCG CTATGCTGAA AACGTTAGCA GCGGCCTGCT CAGCTGCGAT
ATAGCGAGTG GCATACGGGA GCTTCGAGCA AAAACTCCGA ATACTCGCTG GTTGATCGTT
TCTGGCGGTG ACCAGACCGA ACTCCGTGAG GTTTTTGCAC AGCGAAAGCT TGCTGAGATT
TTTGATGGCG GCATATTCGG AAGCCCAGAT GCTAAAGAGG AAATTATTGC TCGCGAGCTA
CGCAGCTCAA ATATCGCACC TCCTGCGCTC TTCATCGGCG ACAGTAAATA TGACTTCAAG
GCAGCTAGCG AATCGAATTT GGATTTCCTT TTTTTGAGTG ACTGGTCCGA AGTTAAGAAC
TGGCAGCAAT GGTGCAATGA GAATAATATA TATGCTCTAG GCAATATTTC ATCTCTACTC
GAAACTTGCA CTCATCCCGA ATAG
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| Protein sequence | MKNIKSNLGD YATLVFDCDG VLLDSNKVKT QAFYEAALPY GEMAAQALAD HHVANGGISR
YKKFSYFLEH IVAQHAEGPS LEHLLDRYAE NVSSGLLSCD IASGIRELRA KTPNTRWLIV
SGGDQTELRE VFAQRKLAEI FDGGIFGSPD AKEEIIAREL RSSNIAPPAL FIGDSKYDFK
AASESNLDFL FLSDWSEVKN WQQWCNENNI YALGNISSLL ETCTHPE
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