| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1573 |
|---|
| Symbol | |
|---|
| ID | 1045320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1764089 |
|---|
| End bp | 1764823 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637144973 |
|---|
| Product | major tail protein, putative |
|---|
| Protein accession | NP_743730 |
|---|
| Protein GI | 26988305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0039923 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTC TCGCTCAGGG TACCCAGGTC TATGCCCTGG TGCCCACAGC TGCAAACCGT
ACCGTATTCG AAGTCATGGA GGTTGAATGC GCCACCGCCT TCAGTCCAGG CGGGAACCCC
GCTGACCAGG TTGAAGTGAC CTGTCTCAGC GACACCGTGC GCAAGTACCT GCGTGGCCTT
CGCACCCCGG GCCAGGCTTC GCTGACCCTC AACGTCGACC CACGCAACGC CTCGCACGTG
CGCCTTCATC AGATCTCGGA AGACGACACC ATCGAGAGCA TTCGTTGGGT GGTCGGTTGG
TCTGACGGCA AGGGCATTAA ACCCACAGTC GGCGTCGCCG GCGCGCTGGC GGCCATTGAA
CTGACCAATG GCGGTACCGG CTACACCTCG GCTCCGACCG TTGCGTTCTC TGGTGGTGGC
GGCACTGGTG CTGCTGCAAC TGCGATCATC GCGGACGGCA AGGTGGTTGG GTTCGATATC
ACCAATGCCG GCTCCGGCTA TACCAGCAAG CCTACTGTCA CCCTCACTGG TGGGGCTGGC
ACTGGCGCTG CTGCTACTGC GGTCCTGGGT GACGCCGATG ACTTCGTGCT CCCGCCCACC
CGTACCTGGT TCCTGTTCGA CGGCTATGTC GCTGACTTCC CCTTCGACCA CGCCGCCAAC
GCAGCGGTAA CCACTGCCGC CACCATCCAG CGCTCCGGCG GCTCCGCCTG GATCCCCAAG
ACCACCAACG CCTGA
|
|---|
| Protein sequence | MAILAQGTQV YALVPTAANR TVFEVMEVEC ATAFSPGGNP ADQVEVTCLS DTVRKYLRGL
RTPGQASLTL NVDPRNASHV RLHQISEDDT IESIRWVVGW SDGKGIKPTV GVAGALAAIE
LTNGGTGYTS APTVAFSGGG GTGAAATAII ADGKVVGFDI TNAGSGYTSK PTVTLTGGAG
TGAAATAVLG DADDFVLPPT RTWFLFDGYV ADFPFDHAAN AAVTTAATIQ RSGGSAWIPK
TTNA
|
|---|
| |