| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1552 |
|---|
| Symbol | |
|---|
| ID | 1045452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 1751590 |
|---|
| End bp | 1752294 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637144952 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | NP_743709 |
|---|
| Protein GI | 26988284 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000031305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGG GGCGCGAGAT TGTTGGCCGC TGCCCTGAGT GCGAAAAGGC CGCCATTGCC
GAGCGCCAGG CCAAGCAACA GGCCGAGGAA ACCCGCCTGA AGCGCGAGGC CATGACCCGC
AAGCTGGGTT CAGCGCTGAT ACCGAAGCGT TTCGCCGAGC GAACCCTGGC CAACTACCGT
GTCGAGCACG AAGGCCAGCG CAAGGCCCTG GCCTACTGCA CGCGTTACGT GGCCGCGTTC
GAGGAGATCG AGCGCACCGG GCGTTGCCTG ATGCTGCTGG GCAGGGTCGG CACCGGCAAG
ACCCACCTGG GCGCCGGTAT GGCCAACGAG CTGATGCGCA ACACCTCGGC TACCGCCGTG
TACCGCACGG TGGGCGCTGT CCTGCAGTCC ATCCGGGCGA CCTACGACCG CCACAGCGAG
CAGTCCGAGG CCGACATCCT GTCCAGCCTG ATCGAGCCAT CGCTGCTGGT GCTGGACGAA
GTCGGCGTCA GCAAGGAGCA GCCGAGCGAG TTCGAGCTGA CCACCCTGTT TTCGATCATC
AACGGGCGCT ACGAGCAAAT GCGCCCCACG GTGGTGATTT CCAACCTGGA AGCCAGCCAA
CTGCGCCACG CCATGGGCGA GCGGTGTTAT GACCGCCTGC GCGAGGGCGG CGGTGTGGTG
GTGCCCTTCG AGTGGGAGTC TCACCGTGGC AAGGAGGAGT TCTGA
|
|---|
| Protein sequence | MLMGREIVGR CPECEKAAIA ERQAKQQAEE TRLKREAMTR KLGSALIPKR FAERTLANYR
VEHEGQRKAL AYCTRYVAAF EEIERTGRCL MLLGRVGTGK THLGAGMANE LMRNTSATAV
YRTVGAVLQS IRATYDRHSE QSEADILSSL IEPSLLVLDE VGVSKEQPSE FELTTLFSII
NGRYEQMRPT VVISNLEASQ LRHAMGERCY DRLREGGGVV VPFEWESHRG KEEF
|
|---|
| |