Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1549 |
Symbol | |
ID | 1045456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1749380 |
End bp | 1750231 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637144949 |
Product | Cro/CI family transcriptional regulator |
Protein accession | NP_743706 |
Protein GI | 26988281 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000188053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACTA CTGATCGAAT CACCAAACTC GTCCTGACCC GTCGCCCACA GTTGGGCGTT CGCAATGTCA AACGCGACAT CGCGAACACC TGCGGAATCA GCTATGAGGC TGTCCGCCAG TGGTTCGCCG GAGATACCGA GAACATCAAG AACGAAAACC TCGTCGCGCT AGCCGAGGGC TACGACACGA CTGTTGATTG GCTTTTGTCT GGGAAGGGTG AGCCACCACG CAAAGGGGCC GCTAAGCAAG AGCAAACAAA AGAGGTAAGC ACTCCGAGTT CCGCTGCAGA CGCAGTGCGA AAGATGCTTG AAAAGCACGG TAAGGGACTG ACCGCTGAGG CCAGGCAGCG GATAGTCAGC GCGGTGGAGC ATGATCCTCA AGGCGAGAAG GAAAGCGGCT TTTTGATCGC CGCCAACCCT GCTACCAGGG GTGATATTTC CATCCCGCAG TACGACATTC GGGCGGCAAT GGGTCACGGC CAAGTCCCAG CTGAATACAG CGAGATCATT AGGAACGTCG TAATAAGTGA AGATTTGCTG CGTGACAAAG GCGTGAACTA CACGGCGCCT CAGTCCTTGG CCATCATCAC CGGATGGGGC CAGAGCATGG AAGGCACAAT CAATGACAAG GACCCTGTAA TCGTTGACCG AGGCGTGAAT GACTACGCAG GGGAAGGCGT TTACGTGCTC ACCTGGCACG GTGACCTTCT GATTAAGCGC CTGCAGCGGA AAGACGAAGA TCACCTCTGG CTGATCTCCG ACAACCCTCA CAACAAGGAT CAGCAGGCCA GGATCGACGA TGTGACAATT CACGCCAAAG TGCTACTTGT GTGGAACGCT CGCAAGGTCT GA
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Protein sequence | MKTTDRITKL VLTRRPQLGV RNVKRDIANT CGISYEAVRQ WFAGDTENIK NENLVALAEG YDTTVDWLLS GKGEPPRKGA AKQEQTKEVS TPSSAADAVR KMLEKHGKGL TAEARQRIVS AVEHDPQGEK ESGFLIAANP ATRGDISIPQ YDIRAAMGHG QVPAEYSEII RNVVISEDLL RDKGVNYTAP QSLAIITGWG QSMEGTINDK DPVIVDRGVN DYAGEGVYVL TWHGDLLIKR LQRKDEDHLW LISDNPHNKD QQARIDDVTI HAKVLLVWNA RKV
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