| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1479 |
|---|
| Symbol | hicB-1 |
|---|
| ID | 1045734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1684535 |
|---|
| End bp | 1684867 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637144880 |
|---|
| Product | hicB protein |
|---|
| Protein accession | NP_743637 |
|---|
| Protein GI | 26988212 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.523187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTAA TGACCTACCG CGGCTATGCC GCACGCATTG ATTACAGCGA TGAAGACCAG
TTACTGATCG GTCATGTTGC CGGCATCCGT GACGTGATCG GCTTTCACGG TGAATCAATC
AGTGAGCTCC GTCGAGCATT CGAAGAAGCT GTCGATGACT ACATCGAGAC TTGCGAAAAA
CTCGGAAGGG AACCTCAGAA AGCTTACTCG GGAAAGCTGA GCCTGCGTCT TGAACCTGCT
CTTCACGCCA GCGTGGCTGC TAAAGCCGAA CTGGCGGAAA AGAGCATTAA CCAATGGGTA
AGTGACATCC TCAGCCAGGC CGCATTCAGC TGA
|
|---|
| Protein sequence | MNVMTYRGYA ARIDYSDEDQ LLIGHVAGIR DVIGFHGESI SELRRAFEEA VDDYIETCEK
LGREPQKAYS GKLSLRLEPA LHASVAAKAE LAEKSINQWV SDILSQAAFS
|
|---|
| |