Gene PP_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1476 
Symbol 
ID1045746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1680927 
End bp1681469 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content59% 
IMG OID637144877 
ProductYaeQ family protein 
Protein accessionNP_743634 
Protein GI26988209 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.21727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGC CGTCCACCAC CTACAAGTTC GAATTGAATC TCACCGACCT TGATCGCAAC 
GTCTACGAAA GCGTCAAACA GACTATCGCT CGGCACCCTT CGGAAACCGA AGAGCGCATG
GCCGTTCGTT TGTTGGCGTA CGCGCTCTGG TACAACGAGA ACTTGTCGTT TGGCCGCGGC
CTGTCGGATG TCGATGAGCC GGCGCTGTGG GAAAAGAGCC TGGACGATCG CGTGCTGCAC
TGGATTGAAG TTGGCCAGCC CGATGCCGAT CGCCTGACCT GGTGCTCGCG CCGTACCGAA
CGCACCAGCT TGCTGGCTTA CGGCAGCCTG CGAGTGTGGG AGGGTAAAGT GGTGAGCGCG
GTCAAGAACC TGAAAAACCT GAGCATTGCC GCTGTGCCGC AAGAGGTGCT GGAAACCCTG
GCGACCGACA TGCCGCGTAG CATCAAGTGG GACGTGATGA TCAGTGAAGG TACGGTATTC
GTGACTGACG ACCGTGGCCA GCATGAAGTG CAACTGCAGT GGCTGCTCGG TGAGCGTGGT
TGA
 
Protein sequence
MAQPSTTYKF ELNLTDLDRN VYESVKQTIA RHPSETEERM AVRLLAYALW YNENLSFGRG 
LSDVDEPALW EKSLDDRVLH WIEVGQPDAD RLTWCSRRTE RTSLLAYGSL RVWEGKVVSA
VKNLKNLSIA AVPQEVLETL ATDMPRSIKW DVMISEGTVF VTDDRGQHEV QLQWLLGERG