Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1388 |
Symbol | |
ID | 1046139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1583558 |
End bp | 1585009 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637144789 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | NP_743547 |
Protein GI | 26988122 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCCG CCCTGCCCCC CACCGCCCTG CGCAACGTGC TCACCGCCCT GATGCTGGCC ATCTTCCTCG GCGCACTGGA CCAGACCATC GTCGCTGTCT CGCTGCCCGC CATCTCGGCG CAGTTCAGCG ATGTCGGCCT GCTGGCCTGG GTCATCTCCG GTTATATGGT GGCCATGACC GTGGCCGTGC CGATCTACGG CAAACTGGGC GACCTTTACG GCCGGCGCCG GATGATCCTC ACCGGTATCA GCCTGTTCAC CCTGGCCTCC ATTGCCTGCG CCATGGCCCA GGACATGCCG CAATTGGTGC TGGCCCGTGT ACTGCAGGGT ATCGGCGCAG GCGGGATGGT CTCGGTGAGC CAGGCAATCA TTGGCGACTT CGTGCCCCCG CGCGAACGCG GCCGCTACCA GGGCTACTTC AGCAGCATGT ACGCCGCGGC CAGCGTGGCC GGGCCAGTGC TGGGCGGCTG GTTGACCGAG TACCTGTCGT GGCGCTGGGT GTTCTGGATC AACCTGCCGC TGGGGCTGGT TGCTTTGTGG GCCATTCGCC GTGCGCTCGC TGACATGCCA GTGCAGCGTC GTGAGGCACA GGTGGACTAC CTTGGCGCCA TGCTGTTGAT TCTCGGCCTT GGCAGCCTGC TGCTGGGCAT CACCTTGGTG GGCCAGGGCC ACGCCTGGGC CGACCCGGCC GTGCTGGCGC TGTTCGGCTG CGCCCTGCTG GGCCTGGCGC TATTCATCGC CCACGAACGC CGCTGCCCGG AGCCGCTGCT GCCGCTCAGC CTGTTCGGCA ACCGTGTGGC AGTGCTGTGC TGGGCGGTGA TCTTCTTCGC CAGCTTCCAG TCCATTTCGC TGACCATGCT CATGCCCCTG CGTTACCAGG GCATTACCGG CGCCGGTGCC GACAGCGCCG CCCTGCATCT GCTGCCGCTG GCCATGGGGC TGCCCATGGG CGCCTTCACA GGAGGCCGCA TGACCAGCCG GACCGGGCGC TACAAGCCAC AGATCCTGGC CGGTGCACTG CTGATGCCAG TGGCCATTTT CGCGATGGCA CTGACCCCGC CGCAATCAGC GTTGCTCAGT GCGCTATTCA TGCTGCTGAC CGGCATAGCC TGCGGGCTGC AATTCCCGAC CTCACTGGTG GGCACACAAA GCGCGGTGGC CAGCAAGGAC ATCGGCGTGG CCACCAGCAC CACCAACCTG TTCCGTTCGT TGGGTGGAGC CATGGGCGTG GCGTGCATGT CCAGCTTGTT GCTGGCACTG CTGCATCAGG GTGGTTTCGA ACTGTCGGGT AATCCGTTGC TGGGGAGCTT GAAGGCCGCA GAGGTGGACC CGGGGACGCA GGGGCGGTTG CTGGAAACGT TCCGGCAGCT GCTGATGGGG AGTGCGGTCG TCGCGGTGCT GGGACTGCTT GCGGCACTGG CCTTGCCCGA CCGGCAATTG CGCGGCCGCT GA
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Protein sequence | MTAALPPTAL RNVLTALMLA IFLGALDQTI VAVSLPAISA QFSDVGLLAW VISGYMVAMT VAVPIYGKLG DLYGRRRMIL TGISLFTLAS IACAMAQDMP QLVLARVLQG IGAGGMVSVS QAIIGDFVPP RERGRYQGYF SSMYAAASVA GPVLGGWLTE YLSWRWVFWI NLPLGLVALW AIRRALADMP VQRREAQVDY LGAMLLILGL GSLLLGITLV GQGHAWADPA VLALFGCALL GLALFIAHER RCPEPLLPLS LFGNRVAVLC WAVIFFASFQ SISLTMLMPL RYQGITGAGA DSAALHLLPL AMGLPMGAFT GGRMTSRTGR YKPQILAGAL LMPVAIFAMA LTPPQSALLS ALFMLLTGIA CGLQFPTSLV GTQSAVASKD IGVATSTTNL FRSLGGAMGV ACMSSLLLAL LHQGGFELSG NPLLGSLKAA EVDPGTQGRL LETFRQLLMG SAVVAVLGLL AALALPDRQL RGR
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