| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1288 |
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| Symbol | algD |
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| ID | 1041882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1472902 |
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| End bp | 1474218 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144690 |
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| Product | GDP-mannose 6-dehydrogenase |
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| Protein accession | NP_743448 |
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| Protein GI | 26988023 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.534034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA GCATCTTTGG TTTGGGTTAT GTGGGTGCAG TCTGTGCAGG CTGCCTGACG
GCGCGTGGCC ATGAAGTGAT CGGTGTGGAC GTGTCCAGCA CCAAGATCGA CCTGATCAAC
CAGGGCAAGT CGCCCATCGT CGAACCTGGC CTGGAAGCAC TGCTGCAACA GGGCATCGCC
AATGGCCGCC TGCGCGGCAC TACCGACTTC GCCGAAGCCA TCCGTGCCAG CGATGTGTCG
ATGATCTGCG TGGGCACCCC CAGCAAGAAA AACGGCGACC TGGGCCTGGA GTACATCGAG
TCCGTGTGCC GCGAAATCGG CTACGTGCTG CGTGACACCA CCCGCCGTCA CACCATCGTG
GTGCGCAGCA CCGTACTGCC TGGCACCGTC AAGAACGTGG TCATCCCGAT CCTCGAAGAC
TGCTCGGGCA AGAAGGCCGG CGTCGACTTC GGCGTGGCGG TCAACCCGGA ATTCCTGCGT
GAAAGCACCG CGATCAAGGA CTACGACCAG CCACCGATGA CAGTCATCGG CGAACTGGAC
AGCGCCAGCG GTGACATCCT CCAGGCCCTG TACGAAGAGC TCGACGCCCC GATCATCCGC
AAGCCGATCG AAGTGGCCGA AATGATCAAG TACACCTGCA ACGTTTGGCA CGCCACCAAG
GTCACCTTCG CCAACGAAAT CGGCAACATC GCCAAGGCCG TGGGCGTCGA TGGCCGCGAA
GTGATGGACG TGGTCTGCCA GGACAAGGTC CTCAACCTGT CCCAGTACTA CATGCGCCCT
GGCTTTGCCT TCGGCGGCTC TTGCTTGCCC AAGGACGTAC GCGCCCTCAC CTACCGCGCC
GCCAGCCTCG ATGTCCGTGC ACCGCTGCTC GACTCGCTGA TGCGCAGCAA CGAATCGCAG
GTGCAGAACG CCTTCGAGCT GATCGAAGCC CACGACAAGC GCAAGGTCGC CCTGCTGGGC
CTGAGCTTCA AGGCCGGCAC CGACGACCTG CGCGAAAGCC CGCTGGTGGA ACTGGCCGAG
CGCCTGATCG GCAAGGGCTA CCAGCTGGAC ATCTACGACG AGAACGTCCA GTACGCCCGT
GTTCACGGCG CCAACAAGGA CTACATCGAG TCGAAGATCC CGCACGTGTC GTCGCTGCTC
AACGCCAACT TGCAGCAGGT GATCGACAAC GCCGACATCA TCGTCCTCGG CAACCGTGAC
GAGCAGTTCC GTGCGCTGGC CCTGCAAGCG CCAGCCGGCA AGCAGGTGAT CGACCTGGTC
GGCTTCATGA ACAAACCGAC CAGCACCACC GCCCGTACCG AAGGCATCTG CTGGTAA
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| Protein sequence | MRISIFGLGY VGAVCAGCLT ARGHEVIGVD VSSTKIDLIN QGKSPIVEPG LEALLQQGIA
NGRLRGTTDF AEAIRASDVS MICVGTPSKK NGDLGLEYIE SVCREIGYVL RDTTRRHTIV
VRSTVLPGTV KNVVIPILED CSGKKAGVDF GVAVNPEFLR ESTAIKDYDQ PPMTVIGELD
SASGDILQAL YEELDAPIIR KPIEVAEMIK YTCNVWHATK VTFANEIGNI AKAVGVDGRE
VMDVVCQDKV LNLSQYYMRP GFAFGGSCLP KDVRALTYRA ASLDVRAPLL DSLMRSNESQ
VQNAFELIEA HDKRKVALLG LSFKAGTDDL RESPLVELAE RLIGKGYQLD IYDENVQYAR
VHGANKDYIE SKIPHVSSLL NANLQQVIDN ADIIVLGNRD EQFRALALQA PAGKQVIDLV
GFMNKPTSTT ARTEGICW
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