Gene PP_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1281 
SymbolalgL 
ID1041918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1463064 
End bp1464179 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content64% 
IMG OID637144683 
Productpoly(beta-D-mannuronate) lyase 
Protein accessionNP_743441 
Protein GI26988016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCGAC CCATGACCCT TTTCAAACGA ATTTCCAGCC CCGCCCTGCT CGCGTTGGCC 
TTGTTTGGTG GTGCCGCGCA CGCCGCGCTG GTACCGCCGC AGGGTTACTA CCAGGGGATC
GAAAAGCTCA AGACCGGTGA TGGTAATTTC CGCTGCGAAG CGGCGCCCCA GCCATACACC
GGCCCGCTGC AGTTTCGCAG CAAGTACGAA GGCTCGGACA AGGCACGGGC AACGCTCAAC
GCTGCCTCGG AAAAGGCCTT CCGCAAGTCG ACCGAAGACA TCACCACGCT GGAGAAAGGC
GTGAGCAAGA TGGTCGGCCA GTACATGCGC GACGGCCGCC CGGCGCAACT CGACTGCACC
CTGACGTGGC TGGGCACCTG GGCACGCGCC GGTGCATTGC TGTCCACCGA CTACAACCAT
ACCGGCAAGT CGATGCGCAA ATGGGCGCTG GGCAGCATGA GCGGTTCATG GTTGCGGCTG
AAATTCTCCA ACTCGCAGCC GCTGGCCGCA CACCAGGCCG AGGCCGACCT GATCGAAAAA
TGGCTCACCC GCCTGGCCGA GCAGACTGTG CGTGACTGGA GCGACCTGCC GCTGGAGAAG
ATAAACAACC ACAGCTACTG GGCGGCCTGG TCGGTCATGG CTACCGCCGT CGCCACCGAC
CGTCGCGACC TGTTCGACTG GGCCGTGAAG GAATACAAGG TCGGCGCCAA CCAGGTGGAT
GACCAGGGCT TCCTGCCCAA CGAAATCAAG CGCCAGCAGC GCGCGCTGGC CTATCACAAC
TACGCCTTGC CGCCGCTGGC GATGATTGCC AGCTTCGCCC AGGCCAATGG CGTCGACCTG
CGCGCCGAGA ACAACTTCGC CTTGCAGCGC CTGGGTGAAG GCGTGCTGGC CGGCGCCCGC
GACCCCAGCC ACTTCAAGGC GCGGGCGGGC AAGAAACAGG ACATGACCGA CCTCAAGGTT
GACAGCAAGT ACTCCTGGCT CGAGCCCTGG TGTGCGCTGT ACCACTGCGT TGGCGACACG
CTTGAGCGCA AGCACGACAT GCAGCCGTTC AACAGCTTCC GGCTGGGCGG CGATGTGACG
CGGGTCTACG ACCCGAGTGC AGAGAGCAAG AAATGA
 
Protein sequence
MRRPMTLFKR ISSPALLALA LFGGAAHAAL VPPQGYYQGI EKLKTGDGNF RCEAAPQPYT 
GPLQFRSKYE GSDKARATLN AASEKAFRKS TEDITTLEKG VSKMVGQYMR DGRPAQLDCT
LTWLGTWARA GALLSTDYNH TGKSMRKWAL GSMSGSWLRL KFSNSQPLAA HQAEADLIEK
WLTRLAEQTV RDWSDLPLEK INNHSYWAAW SVMATAVATD RRDLFDWAVK EYKVGANQVD
DQGFLPNEIK RQQRALAYHN YALPPLAMIA SFAQANGVDL RAENNFALQR LGEGVLAGAR
DPSHFKARAG KKQDMTDLKV DSKYSWLEPW CALYHCVGDT LERKHDMQPF NSFRLGGDVT
RVYDPSAESK K