Gene PP_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1142 
Symbol 
ID1045443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1307909 
End bp1308286 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID637144537 
Producthypothetical protein 
Protein accessionNP_743303 
Protein GI26987878 
COG category[S] Function unknown 
COG ID[COG5626] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.179069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACCGG GTTTTTCTGC AAAAATGCCG GCCTTTTTAT TGACCGATTT TTTGCGGATA 
CCACCCATGA CTGATCAAAC AAGCACCCTC TATGCCAAAT TGCTTGGCGA GACGGCAATC
ATCGAGTGGA AAGCGTTGGA GCGTTTTTGG GCCAAGGGTG ACCTGATTTG GGTCGACCCC
AACCTTGACC TGATCGCCGT TGCCGAGGCG ATGGCCGAGA ATCGCAGCGA GATCTTCGCC
AAGTGGCGTA GTGATGGCAC TGTTGGGCCG GTGTCGGCCG AGCAGGCATT GGACCTGCAA
AGCCGCGACC CAGAGATCTG GGCGGTGGTG GTTTCACCGT TCATCGTGAT TCAGGTGAAG
GGCCAGGAAG AGGCGTGA
 
Protein sequence
MKPGFSAKMP AFLLTDFLRI PPMTDQTSTL YAKLLGETAI IEWKALERFW AKGDLIWVDP 
NLDLIAVAEA MAENRSEIFA KWRSDGTVGP VSAEQALDLQ SRDPEIWAVV VSPFIVIQVK
GQEEA