Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1135 |
Symbol | |
ID | 1045308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1300279 |
End bp | 1301019 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637144530 |
Product | hypothetical protein |
Protein accession | NP_743296 |
Protein GI | 26987871 |
COG category | [S] Function unknown |
COG ID | [COG3650] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0564032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTGGAGTT CGTCCGGTCT CAGTAACGTG GCCAGCTCTT TGGCAAAGAT TCCCCGGAGT TCGCCCATGC GCCTAACCCC TACCCTGCTG CTGACCACCC TGCTACCCCT GTTCGGCGGT TGCCAGCTCA TGGCTGACGC CCCCAACGAC CCGAACATCG GCACCACGCG CATGCAGGGC GAACTGCGTG CCGCCGGTGG CCAGTTGCTG TTCAAGCCGT GCAGCGAAAA CCGCACCTTC GTGATCAACG ACGTCGCCGC CACCGGCATC CTGCAAGAGG CCGCCAACCT GGCCAAGGAT GCCAACGACA AGCTGTTTGC CGATGTCCGA GGGCGCCTTA CCGGCAGCAA GCAGGCCACC AACGACGGCC AACTGGAAGT ACGCCATCTG TACCGCCTGG AACCTTCCAC CCGCGCCTGC GAGGACCCCA ACTTCAAACA GCTGACCCTG CGCGCCAACG GCCACGAACC GGGTTGGGAC ATCAAGGCCA GCGGCAAAGG CATGGTGCTC AACCGCATCG ACCAGCCCCC CCTGCCCCTG CCATTCCTGG AAGAAGAAGT GCCCGGCGGT GGCCTGACCC TGACCAGCGA AGCCAACGGC CAGCACGTGG AGCTATGGGC CGCGCCGCAA CGCTGTGTAG ACAGCGCCAC CGGCGCCATC TACCATCTGC GCGCCGAATT GCGCATCGAC GGCAAGACCC TGCAAGGCTG CGGTTACTAC GGTGGGGCGC GCGACAACTG A
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Protein sequence | MWSSSGLSNV ASSLAKIPRS SPMRLTPTLL LTTLLPLFGG CQLMADAPND PNIGTTRMQG ELRAAGGQLL FKPCSENRTF VINDVAATGI LQEAANLAKD ANDKLFADVR GRLTGSKQAT NDGQLEVRHL YRLEPSTRAC EDPNFKQLTL RANGHEPGWD IKASGKGMVL NRIDQPPLPL PFLEEEVPGG GLTLTSEANG QHVELWAAPQ RCVDSATGAI YHLRAELRID GKTLQGCGYY GGARDN
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