Gene PP_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1135 
Symbol 
ID1045308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1300279 
End bp1301019 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID637144530 
Producthypothetical protein 
Protein accessionNP_743296 
Protein GI26987871 
COG category[S] Function unknown 
COG ID[COG3650] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0564032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGAGTT CGTCCGGTCT CAGTAACGTG GCCAGCTCTT TGGCAAAGAT TCCCCGGAGT 
TCGCCCATGC GCCTAACCCC TACCCTGCTG CTGACCACCC TGCTACCCCT GTTCGGCGGT
TGCCAGCTCA TGGCTGACGC CCCCAACGAC CCGAACATCG GCACCACGCG CATGCAGGGC
GAACTGCGTG CCGCCGGTGG CCAGTTGCTG TTCAAGCCGT GCAGCGAAAA CCGCACCTTC
GTGATCAACG ACGTCGCCGC CACCGGCATC CTGCAAGAGG CCGCCAACCT GGCCAAGGAT
GCCAACGACA AGCTGTTTGC CGATGTCCGA GGGCGCCTTA CCGGCAGCAA GCAGGCCACC
AACGACGGCC AACTGGAAGT ACGCCATCTG TACCGCCTGG AACCTTCCAC CCGCGCCTGC
GAGGACCCCA ACTTCAAACA GCTGACCCTG CGCGCCAACG GCCACGAACC GGGTTGGGAC
ATCAAGGCCA GCGGCAAAGG CATGGTGCTC AACCGCATCG ACCAGCCCCC CCTGCCCCTG
CCATTCCTGG AAGAAGAAGT GCCCGGCGGT GGCCTGACCC TGACCAGCGA AGCCAACGGC
CAGCACGTGG AGCTATGGGC CGCGCCGCAA CGCTGTGTAG ACAGCGCCAC CGGCGCCATC
TACCATCTGC GCGCCGAATT GCGCATCGAC GGCAAGACCC TGCAAGGCTG CGGTTACTAC
GGTGGGGCGC GCGACAACTG A
 
Protein sequence
MWSSSGLSNV ASSLAKIPRS SPMRLTPTLL LTTLLPLFGG CQLMADAPND PNIGTTRMQG 
ELRAAGGQLL FKPCSENRTF VINDVAATGI LQEAANLAKD ANDKLFADVR GRLTGSKQAT
NDGQLEVRHL YRLEPSTRAC EDPNFKQLTL RANGHEPGWD IKASGKGMVL NRIDQPPLPL
PFLEEEVPGG GLTLTSEANG QHVELWAAPQ RCVDSATGAI YHLRAELRID GKTLQGCGYY
GGARDN