| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1106 |
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| Symbol | |
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| ID | 1045251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1264401 |
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| End bp | 1265417 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637144501 |
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| Product | RNA processing exonuclease |
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| Protein accession | NP_743267 |
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| Protein GI | 26987842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.599734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCG TCATCGCCCG CCCCGAAGGC CTGTACTGCC CGCCCGGAGA TTTCTACATC
GACCCCTGGC GGCCCGTGGA GCGGGCTGTC ATTACCCATG GCCACGGCGA CCACGCACGC
ACCGGCAATG GCCATTATCT GACCGCCAGC CCCGGTGCCG GCATTCTGCG CAGCCGCCTG
GGCCAGGACA TCAATCTGCA GACCCTGCCC TACGGTGAGC GCCTGCTGCA CCACGGCGTG
ACGTTGAGCC TGCACCCGGC CGGGCACGTG CTGGGTTCGG CACAGGTGCG CCTGGAGTAT
CGAGGTGAAG TCTGGGTTGC ATCCGGTGAC TACAAGGTAG AACCCGATGG CACCTGTACG
CCCTTCGAAC CGGTGGCGTG CCACACCTTC ATCACCGAGT CGACCTTCGG CCTGCCGATC
TACCGCTGGC CAAGCCAGAG CGAGATCTTC GCCAGCATCA ATGCCTGGTG GCGGGCCAAC
AGTGAACAGG GCAAGGCCAG CGTGCTGTTC TGCTATGCCT TCGGAAAGGC CCAGCGGATT
CTGCATGGGC TGGATGCCAG CATCGGCCCG ATCCTCGTGC ATGGCGCCAT GGAGCCGCTC
AACCGGGTGT ACCGGGATGC CGGCATCCGC CTGCCGGAAA CCCGCTACGC AGGCGATATT
CCGCGCAACG ATCCACTGCT GCGCCAGGCA CTGGTCCTGG CGCCCCCGTC AGCCGGTGGC
AGTAGCTGGA TGCGCCGTTT TGGCGATTAC AGTGATGCCT TCGCCAGCGG CTGGATGCTG
CTACGCGGCG CCCGCCGGCG GCGCGGCGTG GACCGGGGCT TTGTGCTGTC CGACCACGCC
GACTGGCCTG GCCTGCTCTG GGCCATTGGC CAGACCGGTG CCCAACGGGT GATGGTCACT
CACGGCTCGG TCGAGGTACT GGTGCGCTAC CTCACCGAAC AAGGCCTGGA TGCCCGCGCC
TTCGTCACCG AGTATGGCGA CGAAGACGAT GTGCCCAACA CCGCCCCCTC GCCATGA
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| Protein sequence | MDLVIARPEG LYCPPGDFYI DPWRPVERAV ITHGHGDHAR TGNGHYLTAS PGAGILRSRL
GQDINLQTLP YGERLLHHGV TLSLHPAGHV LGSAQVRLEY RGEVWVASGD YKVEPDGTCT
PFEPVACHTF ITESTFGLPI YRWPSQSEIF ASINAWWRAN SEQGKASVLF CYAFGKAQRI
LHGLDASIGP ILVHGAMEPL NRVYRDAGIR LPETRYAGDI PRNDPLLRQA LVLAPPSAGG
SSWMRRFGDY SDAFASGWML LRGARRRRGV DRGFVLSDHA DWPGLLWAIG QTGAQRVMVT
HGSVEVLVRY LTEQGLDARA FVTEYGDEDD VPNTAPSP
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