| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1086 |
|---|
| Symbol | pyrC |
|---|
| ID | 1045131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 1244479 |
|---|
| End bp | 1245525 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637144481 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | NP_743247 |
|---|
| Protein GI | 26987822 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0418] Dihydroorotase |
|---|
| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATC GCCTGACCCT CCTGCGCCCC GACGACTGGC ACATCCATCT GCGCGATGGT
GCCGTCCTGC CCCACACCGT TGGCGACGTG GCGCGTACCT TCGCCCGTGC CATCATCATG
CCCAACCTCG TGCCGCCCGT GCGCAATGTC ACCGAGGCCG GCGCCTACCG TGAGCGCATT
CTGGCTGCCC GCCCGGCCGG CAGCCGCTTC GAGCCGCTGA TGGTGCTGTA CCTCACCGAC
CGCACCAGCC CCGAGGACGT CCGCGCGGCC AAGGCCAGCG GTTTCGTGTA CGCCGCCAAG
TTGTACCCGG CCGGCGCCAC CACCAACTCC GATTCCGGCG TGACCAGCAT CGACAACATC
TTCCCGGCCA TAGAGGCACT GGCGGAAGTG GGCATGCCGC TGCTGGTGCA TGGCGAAGTG
ACCCGCAGCG AGATCGACGT GTTCGACCGC GAGAAGCGCT TCATCGACGA GCACATGCGC
CGTGTGGTCG AGCGCTTCCC GACGCTGAAA GTGGTGTTCG AACACATCAC CACCAGTGAT
GCCGCGCAGT TCGTCACCGA GGCCCCGGCC AACGTCGGTG CGACCATCAC CGCCCAGCAC
CTGCTGTACA ACCGCAACCA CATGCTGGTC GGCGGCATTC GCCCGCACTT CTACTGCCTG
CCGATCCTCA AGCGCAACAC CCACCAGGTG GCCTTGCTGG ACGCAGCCAC CAGCGGCAAT
CCGAAGTTCT TCCTCGGCAC CGACTCGGCA CCTCATGCCC GTCACGCCAA GGAAGCAGCC
TGCGGTTGCG CGGGTTGCTA CACCGCCTAT GCGGCCATCG AGATGTACGC CGAAGCGTTC
GAGCAGCGTA ACGCGCTGGA CAAGCTGGAA GGCTTCGCCA GCCTGCACGG CCCGGCCTTC
TATGGCCTGC CGGCGAACAC CGACACCATT ACCCTGGTCC GCGAAGAATG GACCGCTCCG
GAAAGCCTGC CATTTGGCGA GCAAACCGTA GTCCCGCTGC GCGCTGGCGA AAAACTGCGC
TGGCGCCTGC TGGAGAAAAA CGCGTGA
|
|---|
| Protein sequence | MSDRLTLLRP DDWHIHLRDG AVLPHTVGDV ARTFARAIIM PNLVPPVRNV TEAGAYRERI
LAARPAGSRF EPLMVLYLTD RTSPEDVRAA KASGFVYAAK LYPAGATTNS DSGVTSIDNI
FPAIEALAEV GMPLLVHGEV TRSEIDVFDR EKRFIDEHMR RVVERFPTLK VVFEHITTSD
AAQFVTEAPA NVGATITAQH LLYNRNHMLV GGIRPHFYCL PILKRNTHQV ALLDAATSGN
PKFFLGTDSA PHARHAKEAA CGCAGCYTAY AAIEMYAEAF EQRNALDKLE GFASLHGPAF
YGLPANTDTI TLVREEWTAP ESLPFGEQTV VPLRAGEKLR WRLLEKNA
|
|---|
| |