| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0707 |
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| Symbol | |
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| ID | 1044538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 820472 |
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| End bp | 823039 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144100 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | NP_742868 |
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| Protein GI | 26987443 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.441898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCACCGC GTGGTGCGCC GGGATGGCGA CATCAGCGGT TACCGCTGGG GCGTGGAGCG
CAAACAGCAA TTGCTGAAGC GAGAAACGGC ACTCTCCTGA CCGCCCGAAG CCGCGTAGAA
TCTCCCGCCA AATCGAATTG CAAAGAGGAA TATTCGATGA GGCGTGTCAG CCTTGCCCGT
TATTGCCCAG GTCTGATTGC CCTGCTGGCC CTGATGCTGT TGCTTGTCAG CCCGGCCTGG
TCGGCCCCGG CCACGCCATT GTCCAACCTG GCGGCTGCCG AGGCGCCCGC ACTGGACGAA
AACGCCAGCC TCGAACAACT GAGCGACCGC TTGGACCTCA TCCGCCAAGG CGTCACCAGC
GAGGCTAACG ACGACGTGCT GTCGCAACTG CGCCTGGGCG CGATGCAGGT TCAGCGTCAA
GCTGATGCAT TGAGTGCGCT GCGCACTGCC GATGTGGGAA AACTCGACGA CCAGCTGAAG
GTCATCGGCC CGGCCCAGCC GGACGAGGCC GCTACCCTGA CGCAGCAGCG CAAAGCGCTG
GAGGCCGAGA AAAAGGCGCT GGTAGCCCAG CAGGATCAGG CCACCAAGCT GACCCAGTCG
GCCCGTGACC TGTCCACGCA AATCGTCAAC CTGCGCCGCA GCCAGTTCAA CTCGCAAATC
ACCAGCCGCG CAGCCTCGCC GCTGAGCCCG GCGTTCTGGC AGAGCATCAT CCGCCCCACC
CAGGACGACG TAGCGCGCCT GCGTGACCTG CGCGGGGAGG CGGCCGACGC CATCAGCAGC
GCCTTCAGCG CCGAAAACCG CTGGCTGTTC GTTGCCAGCC TGGTGGCGGC GATTCTGGTG
TGGACGTTGG TACGGCGCGT GCTTGAACGC TTGCTGGCCA GTGCCATGAT CCGTTGGTTG
CCGGAGGGCC GCCTGCGCCG CAGCGCCTTG GCTCTGGGCG TTAGCCTGGC AACCCTGGGC
ACCATCGCCG GCTCGGTGTC TTTGCTGCGC TGGGGGCTGG AAAGCAATGC GCGATTGGGT
TCGGATATCA CCAGCCTGAC CAATCACATT CTTACCCTGG TGGTGTTCAG TGCCTTCATC
ACAGGCCTGG GCCGCGCCAT GCTGATGCTG CAGCGTCCGT CCTGGCGGTT GCCGGCGATC
CACGACGAAG TCGCCAGTGC GCTGGGCTGG TTCCCGAAGG TGCTGGCATT GGCACTGATG
GTCATGATGA CCATGGAGCG CATGAACAGC GTGATCGGTG CCAGCCTGGC GCTGACGGTG
GCCGTCAACG GGCTGACCGC GCTGGTGGTG GCGCTCACCT TTGCAGGCGC GCTGCTGTGT
TACCGCCGCA CCCTGCGCAA GCATGACCTG GAGCGCCCGA CGGGCCTGGC CGGGCTGATC
CCGTTCGTGA TGGTCATCTG GCTGACGTTG ATCCTGCTGG CACTGCTCAC CGGCTACCTG
ACACTCGCCT ATTTCCTCAC CGCCAAGCTG TTGTGGGTCA GCCTGGTGAT CACCTGTGCC
TACTTGCTGA CCACCTTCTT CGGCGACCTG TGCGAAACCC TGCTGTCGCC CCGACAGCCC
GGTGGCCTGG CACTGGCGTC GACCCTGGGC CTGGCGCCTC GCCATCAGGC GCAGGCCAGC
ACCATACTGG CCGGCATCGG CCGCACTGTC GTGCTGTTCC TGGCACTGCT GCTGGTGTTG
ATGCCGTCGG GTACCAGCCC TAGCGAATTG CTGTTGAGTC TGGGCGACTG GGATGGGACC
GGCGGCAAGG TGCTCGGCAA CCTGAACATC GTGCCGCAGG ACATCCTGCT GGCCTTGGCG
ATCTTCCTCG GTGGCCTGTT CGCCATCCGT GTGGTCAAGC GCTGGCTGAG CGACCGCCTG
CTGCCGGAAA CCGAGATGGA CGCCGGCATG CGGGCCTCGC TGGTGACCCT GGTGGGTTAC
CTGGGTTTCC TGTTCCTGGC CATGTTGGTG ATGTCGACCT TGCGTATCAA CCTCACCAGC
CTGACCTGGG TGGTCAGTGC CCTGTCGGTC GGTATCGGTT TCGGTTTGCA GCAGATCGTG
CAGAACTTCA TTTCCGGCCT GATCCTGCTG ACCGAGCGCC CGGTGAAGGT CGGCGACTGG
GTCAGCCTGG CGGGTGTCGA GGGTGATATC CGCCGCATCA ATGTCCGCGC CACCGAGATC
CAGATGTCTG ACCGTTCCAC GGTGATCGTG CCCAATTCGC AGTTCATCTC GCAGAACGTG
CGCAACGTGA CCATGGGCAA TGCGCTGGGC GTGGTCAGCA TTACCTTGAC ACTGCCGCTG
GAGACTGATG CCAACCGCGT CCGGGAGCTG CTGCTGGCGG CTTACCATGA GCATGAGGCG
ATTCTGGATG CGCCAGCTGC CTCGGTGTCG TTCAAGGACC TGACGGCCAG CGGTATGGTG
ATTGGTGTGA GTGGCTATGT GGCCGGGCCG CGGCAGGTAT CGGGAGCACG CAGCGACCTG
CTGTTCACCA TTCTTGGCCG GTTGCGTGAT GAAGGCATTC CACTGTCTTC GCCGCAGAGC
ATGGTGCTGG TGCAGGAGGG CGCGCGTCCG GCTGACGAGT CGATGTAG
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| Protein sequence | MPPRGAPGWR HQRLPLGRGA QTAIAEARNG TLLTARSRVE SPAKSNCKEE YSMRRVSLAR
YCPGLIALLA LMLLLVSPAW SAPATPLSNL AAAEAPALDE NASLEQLSDR LDLIRQGVTS
EANDDVLSQL RLGAMQVQRQ ADALSALRTA DVGKLDDQLK VIGPAQPDEA ATLTQQRKAL
EAEKKALVAQ QDQATKLTQS ARDLSTQIVN LRRSQFNSQI TSRAASPLSP AFWQSIIRPT
QDDVARLRDL RGEAADAISS AFSAENRWLF VASLVAAILV WTLVRRVLER LLASAMIRWL
PEGRLRRSAL ALGVSLATLG TIAGSVSLLR WGLESNARLG SDITSLTNHI LTLVVFSAFI
TGLGRAMLML QRPSWRLPAI HDEVASALGW FPKVLALALM VMMTMERMNS VIGASLALTV
AVNGLTALVV ALTFAGALLC YRRTLRKHDL ERPTGLAGLI PFVMVIWLTL ILLALLTGYL
TLAYFLTAKL LWVSLVITCA YLLTTFFGDL CETLLSPRQP GGLALASTLG LAPRHQAQAS
TILAGIGRTV VLFLALLLVL MPSGTSPSEL LLSLGDWDGT GGKVLGNLNI VPQDILLALA
IFLGGLFAIR VVKRWLSDRL LPETEMDAGM RASLVTLVGY LGFLFLAMLV MSTLRINLTS
LTWVVSALSV GIGFGLQQIV QNFISGLILL TERPVKVGDW VSLAGVEGDI RRINVRATEI
QMSDRSTVIV PNSQFISQNV RNVTMGNALG VVSITLTLPL ETDANRVREL LLAAYHEHEA
ILDAPAASVS FKDLTASGMV IGVSGYVAGP RQVSGARSDL LFTILGRLRD EGIPLSSPQS
MVLVQEGARP ADESM
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