Gene PP_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0610 
Symbol 
ID1044427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp716421 
End bp716885 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID637143997 
Producthypothetical protein 
Protein accessionNP_742772 
Protein GI26987347 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4726] Tfp pilus assembly protein PilX 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACC AGCGTGGCGT GGTTCTTCTA CTGGCCTTGG TCCTGAGCGT CCTGCTGGGC 
CTGCTTGCCA CATCTGCCCT GCGCGACGCG CTGGTGGAAA CGCGGATGAC CGGCTACCTG
AGCGATGGCC TGATGGCGCT GGAAGAGGCT GAGGCCACTT TGCTGGCCGG GGTACGCGAA
CTTGAACGGG CGCCCCCTGA CGCTTGTAGC GCGTGCCCGC CACCGCCCAG GCCGCACGAT
CTGATTGGGC AGTGGCAAAG TACCCAGACC GGCTTTTTCC AGCTGCAGAA CCTGGGTGTC
AGCGAACGTG CCGCGCACAT GCCCGAAGGG CAGCCGGTTA GCCTGTTCCG GATTACCGCC
GTCAGCAAGC AAAGCCGCTC ACGGCATGTG CTGGAAGCGG TCTACGCCAT GGCCGGCAAT
CAAACCCAAC GCATCACCTG GCGACAAAGA TTGCGAGGAG ACTGA
 
Protein sequence
MTHQRGVVLL LALVLSVLLG LLATSALRDA LVETRMTGYL SDGLMALEEA EATLLAGVRE 
LERAPPDACS ACPPPPRPHD LIGQWQSTQT GFFQLQNLGV SERAAHMPEG QPVSLFRITA
VSKQSRSRHV LEAVYAMAGN QTQRITWRQR LRGD