Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0610 |
Symbol | |
ID | 1044427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 716421 |
End bp | 716885 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143997 |
Product | hypothetical protein |
Protein accession | NP_742772 |
Protein GI | 26987347 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4726] Tfp pilus assembly protein PilX |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCACC AGCGTGGCGT GGTTCTTCTA CTGGCCTTGG TCCTGAGCGT CCTGCTGGGC CTGCTTGCCA CATCTGCCCT GCGCGACGCG CTGGTGGAAA CGCGGATGAC CGGCTACCTG AGCGATGGCC TGATGGCGCT GGAAGAGGCT GAGGCCACTT TGCTGGCCGG GGTACGCGAA CTTGAACGGG CGCCCCCTGA CGCTTGTAGC GCGTGCCCGC CACCGCCCAG GCCGCACGAT CTGATTGGGC AGTGGCAAAG TACCCAGACC GGCTTTTTCC AGCTGCAGAA CCTGGGTGTC AGCGAACGTG CCGCGCACAT GCCCGAAGGG CAGCCGGTTA GCCTGTTCCG GATTACCGCC GTCAGCAAGC AAAGCCGCTC ACGGCATGTG CTGGAAGCGG TCTACGCCAT GGCCGGCAAT CAAACCCAAC GCATCACCTG GCGACAAAGA TTGCGAGGAG ACTGA
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Protein sequence | MTHQRGVVLL LALVLSVLLG LLATSALRDA LVETRMTGYL SDGLMALEEA EATLLAGVRE LERAPPDACS ACPPPPRPHD LIGQWQSTQT GFFQLQNLGV SERAAHMPEG QPVSLFRITA VSKQSRSRHV LEAVYAMAGN QTQRITWRQR LRGD
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