| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0579 |
|---|
| Symbol | |
|---|
| ID | 1044378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 676405 |
|---|
| End bp | 676803 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637143962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_742742 |
|---|
| Protein GI | 26987317 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1694] Predicted pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.59137 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGAGAGC CTGTAGGGCC GGGCCTGTCC TGGCGGATAC GCTTGCTTTG CATCGGGCCT
GGGCAGAAGC TATGCAGCAA TAGGAGACCC CCGATGAACC TGCAAGAACT CACCCAACGC
CTGCATCAGA TCCGCGATAC CAATGACTGG CGCGGCTTCC ACAGCCCGAA GAACCTGGCC
ATGGCCGCCA GCGTCGAAAT GGCCGAACTG GTAGAAATCT TCCAGTGGCT GAGCGAGGAC
GAATCGCGCC AGCTGCCTGC CGACAAACTC GCCCACGCCG GCCAGGAGAT CGGTGACGTG
GTGCTCTACC TGTTGCTGCT GTGCAGCGAA CTGGGTCTGG ACATGGACCA GGTGGTGCGT
GCCAAGCTGG CCGACAGCGA GAGGCGCTTC GCCCGATGA
|
|---|
| Protein sequence | MGEPVGPGLS WRIRLLCIGP GQKLCSNRRP PMNLQELTQR LHQIRDTNDW RGFHSPKNLA
MAASVEMAEL VEIFQWLSED ESRQLPADKL AHAGQEIGDV VLYLLLLCSE LGLDMDQVVR
AKLADSERRF AR
|
|---|
| |