Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0553 |
Symbol | acoC |
ID | 1044339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 641878 |
End bp | 642984 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637143936 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | NP_742716 |
Protein GI | 26987291 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA TCCATACCCT GACTATGCCC AAGTGGGGCC TGTCGATGAC CGAGGGCCGG GTGGACACCT GGCTCAAGCA GGAAGGTGAC GAAATCAGCA AGGGCGACGA GGTGCTGGAC GTCGAGACCG ACAAGATCAG CAGCAGCGTC GAAGCGCCTT TCAGCGGCGT GCTGCGCCGC CAGGTAGCCA AGCCGGATGA AACCCTGCCC GTCGGCGCAC TGCTGGCGGT GGTAGTCGAA GGCGAAGCAG AGGAGGCCGA GATCGATGCC GTGGTACAGC GCTTCCAGGC CGAGTTCGTC GCCGAAGGTG GCGCCGACCA AAGCCAGGGG CCGGCCCCTC AGAAGGCGGA AGTAGGCGGG CGCCTGCTGC GCTGGTTCGA GCTGGGTGAA GGCGGTACAC CGCTGGTGCT GGTGCACGGG TTTGGTGGTG ACCTCAACAA CTGGCTGTTC AACCACCCGG CGCTGGCTGC CGAGCGGCGG GTCATCGCCC TCGACCTGCC GGGCCACGGC GAGTCGGCCA AGGCCCTGCA GCGGGGCGAC CTGGATGAGT TGAGCGAAAC CGTGCTCGCC CTGCTCGACC ACCTGGACAT CGCCAAGGCC CACCTGGCCG GCCATTCCAT GGGCGGAGCC GTCAGCCTCA ACGTGGCGCG CCTGGCCCCG CAGCGGGTGG CCAGCCTGAG CCTGGTGGCC AGCGCCGGCC TGGGCGAAGC GATCAACGGG CAGTACTTGC AAGGCTTCGT CACTGCGGCC AACCGCAATG CACTCAAACC GCAGATGGTG CAGTTGTTTG CCGACCCGGC GCTGGTCACC CGGCAAATGC TGGAGGACAT GCTCAAGTTC AAGCGCCTGG AAGGTGTGGA CCAGGCCCTG CAGCAACTGG CAGGGGCGCT CGCCGACGGC GACCGGCAGC GCCATGACTT GCGCGGGGTC CTTGGCAATC ACCCGGCACT GGTGGTGTGG GGTGGCAAGG ATGCGATCAT CCCGGCCAGC CATGCCGAGG GCCTGGAAGC CGAAGTACAG GTGCTGCCAG AGGCCGGCCA CATGGTGCAG ATGGAGGCGG CCGAACAGGT CAACCAGCAA CTGCTCGCAT TCCTGCGCAA GCACTAA
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Protein sequence | MSQIHTLTMP KWGLSMTEGR VDTWLKQEGD EISKGDEVLD VETDKISSSV EAPFSGVLRR QVAKPDETLP VGALLAVVVE GEAEEAEIDA VVQRFQAEFV AEGGADQSQG PAPQKAEVGG RLLRWFELGE GGTPLVLVHG FGGDLNNWLF NHPALAAERR VIALDLPGHG ESAKALQRGD LDELSETVLA LLDHLDIAKA HLAGHSMGGA VSLNVARLAP QRVASLSLVA SAGLGEAING QYLQGFVTAA NRNALKPQMV QLFADPALVT RQMLEDMLKF KRLEGVDQAL QQLAGALADG DRQRHDLRGV LGNHPALVVW GGKDAIIPAS HAEGLEAEVQ VLPEAGHMVQ MEAAEQVNQQ LLAFLRKH
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