Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0524 |
Symbol | |
ID | 1044300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 608128 |
End bp | 608940 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637143907 |
Product | periplasmic binding protein |
Protein accession | NP_742687 |
Protein GI | 26987262 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACTGC TACCTGGCCT GCTGGCGTTG TTCGCCTGCA CCGTACTGGC TGCAGAACCG CTACGTGTCG TCAGTCTGGC CCCCTCGATG AGCGAGATCA TGCTTGAGCT GCAGGCCGAC GACCTGCTGG TGGGCGTGCT CGATGGCGGC GAACGGCCGG CTGCACTGCG CCACTTGCCT TCGGTCGGGC GCCAAGGGCA ACTGGACATG GAGCGCCTGC TCAGCCTGCG CCCCGACCTG TTGCTGCTGT GGCCAGGCAG TGTGCCGCCG GCCCAGCGCG ACCAACTCAA GCGCCTGGGT ATCGCCACCT TCAGCGCCGA ACCCCATGAC ATCAGCCAGC TGATCGAGCA GATCGAGGCC ATTGCCGAGC GTGTCGGGCG TGCCAAGCAG GGTCATTCAT ACGCGCGAGC CCTGCGTGAG CGGCTGCAGC AGCTGCGCCA GCAGTATCGG CGTGACGAAC CCTTGCAGGT GTTTTATCAA GTCTGGGATC GGCCGTTGTA CACGCTCGGT GGCCGCCAGG TGGTGACCGA CGCCCTGGCC GTGTGCGGGG CGCGCAATGT GTTCGCCGAC CTTGGCCAGC CGGCGCCACA GGTGAATGTA GAGTCCGTGC TGCTGCGTAA TCCGCAGGTC ATCCTGGCCG CTGATGAGGC GCAACTGGCC AGCTGGAAGG CCTGGCCGCA GATTCGGGCG GTGGCTGATG GGCGTCTGCT GGTGGTGCCG GACAAAGGGC TGGAGCGCCC CAGCGGGCAG ATGATCGAAG CCACCGCCCG CTTGTGTGCG TTGCTGGACG CTAAAGCGCC GGTGTCCAGG TGA
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Protein sequence | MRLLPGLLAL FACTVLAAEP LRVVSLAPSM SEIMLELQAD DLLVGVLDGG ERPAALRHLP SVGRQGQLDM ERLLSLRPDL LLLWPGSVPP AQRDQLKRLG IATFSAEPHD ISQLIEQIEA IAERVGRAKQ GHSYARALRE RLQQLRQQYR RDEPLQVFYQ VWDRPLYTLG GRQVVTDALA VCGARNVFAD LGQPAPQVNV ESVLLRNPQV ILAADEAQLA SWKAWPQIRA VADGRLLVVP DKGLERPSGQ MIEATARLCA LLDAKAPVSR
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