| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0409 |
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| Symbol | |
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| ID | 1044129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 496127 |
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| End bp | 498514 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143788 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | NP_742575 |
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| Protein GI | 26987150 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAG TGCGTCGCCT GTTGGTTATC GGCTGCTTGT GGCTGCCCTT GATTGCCTGG
GCCAAGCCCG AGGCGCTGCC CTCTGTGGTG CTGGAGCCTG ACCAGCAGCA GTGGCTGGAC
ACCCACCGCA GCCTGCGTGT CGGCCTGGTG TTGCAGGCGC CCTACGCCCA GTTCGACCGG
CGTCTGCAGC AACTGTACGG GGCCAATGTG GAACTGGTGA ATAGCCTGGC GCAGACGCTG
CGACTGGACC TCACCTGGCG TAACTTCACT GACCAGGGCA GTTTGGAACA TGCCCTGCAG
AGCGGCGAAA TCGACTTCGC CCCTGGCCTT ACCCAGACGC CGGCCAGCCT GCGCCTGTGG
CTATTCAGCG ACCCGTACAT GCGCGTGCCA CAGCTGGTGG TGGGGCCGCG CACCGGGGCC
ATGGCCGTGG AACTGGAAAA GCTTGAAGCC GAGCAACGCG TGGCGGTGCG CATGCCCAGC
CCGCTGGCGG ATTACCTGCG CGGCAACTAC GGCAACCTCA ACCTGCAGGG GGTGCCCGAC
GATCGTGAGG CCTTGCAACT GGTGGTAGGT GGCCAGGCCA GTTTCGCCGT GCTGGATGAA
GCGCAGCTCA GCCGCCTGTC GCGCGAGAGC GAGTTCGGTG AGCTGGCGGT GGTCGGCGAT
ATTGGCCTGC CGCAACTGTT GCGTATCGGT TCGCGGCGCG ACTGGCCGAT GCTGGCCGAT
GTACTTGAAC GTGGCTTGCA GGCCGTGCCG GCCAAGGAGC TGGAGCAACT GCATCAGCGC
TGGTTGCAGC CGAAATACCC GCGCCTGAGC GAGTCGCCGG GCTTCTGGCA GAACATGGCC
TTGTTGTTCG GTCTGTTGCT GTTGTGTGCC TTGGCCACGC TGGTGTGGCA ACGCCGTCAG
CAGCGCCAGC TGGAGCGCAG CCTGTTGGCC GCGCGAGAAA GCCTTGTTGA GCGCCAGGTG
CGCGAAGAGG CGTTGCGGCT GAGCCAGTTC GCCATCGATC AGAGCACCGT GGGTATCCTC
TGGGTCAACT GGGACAGCCA TGTGCGTTAC GCCAACCATG CCGCCGAGCG CATGTTGGGC
TACAGCGAAG GGGCGTTGCT GGAGCGGCCG CTAAGCGACT TCGAGCCAAG CCTGAACATG
GACCGTTGGC TAGAGCTGTG GAAGGGTGCG CGGACAGGGG CGGGGGGTGT CGGTCAGTTT
GAGACGCAAT GCCGGCGGGC TGATCAAAGC TTGCTACCCG TGGAGCTGTC GCTGAGCTTT
CTGCGCTTTC GTGATTCCGA ATATCTGGTG GTCTACCTCG CCGATGTCAC CGAGCGCCAC
CGTGCCTTGG CGGCCCTTCG CGAAAGCGAG GCGCGGCTTA AGGGCATTGC TGGCAACGTA
CCAGGGTTGG TGTTTCGCCT GGAGCGTGAC CCGGCCGAGG GCGATCTGGA GTTCCCCTAT
ATCAGTGAGG GTAGCGAGGC TTTGGTGGGT TATGCACCCA GCGAGATCCA GCACCCGCAG
ATGGGCCTGC GCAACCTGGT GCACCCCGAG GACCGTGCTG ATTATCACAG GGTGCAGGAC
CTGGCCCTGG CCAGCGACCA GGACTGGTCC TGGCAGGGGC GCATCCTCAC CCGGCAGGGC
GAACAGCGCT GGGCCGATAT CAAGGCCAGC GCCCGGCATC TGGGCAACGG CCAGGTAGTG
TGGGACGGTG TAGTCTGGGA CATCACACAG GGCAAGCGGG CCGAGCTGGC GCTGGCGAAG
TCCCAGGAGC AGCTGCGCGA ACTCTCGGCC CACCTGGAGA GCGTGCGTGA AGAGGAAAAA
GCCCGTATCG CCCGGGAAGT GCATGATGAA CTGGGGCAGA TGCTGACCGT GCTCAAGCTG
GAAGTGTCGA TGTGCGAGCT GGCCTATGCC GAGCTGGACC CTGGCCTGAA TGATCGCCTG
GCGAGCATGA AACGCCTGAT CGCCCAGTTG TTCCAGTTGG TACGCGATGT CGCCACTGCC
TTGCGTCCGC CGATCCTCGA TGCCGGCATT GCCTCGGCCA TCGAATGGCA GGCGCGGCGT
TTCGAGGCAC GTACGCAAAT CCCCTGTCTG GTGCAAGTAC CCGATAATCT GCCAGCATTG
AGTGATGCCA AGGCCACCGG GCTGTTTCGT ATCCTCCAGG AGGCGCTGAC CAATGTGATG
CGTCACGCCC AGGCGCACAG CGTAGAGATT GAGCTGGTAC GTGAGGGCGG ACAGTTGCGC
ATGACGGTCA GTGATGATGG CCAAGGCTTT TGCCGCGAGC AGACCCGGCC CACCTCATTT
GGCCTGGTGG GTGTGCGCGA GCGGGTGCTG ATGCTGGGGG GGAGCATGAC GCTGGAAAGC
GAGCCGGGCG AAGGCACCAG CCTGAGTGTG GCCATTCCGT TGGAGTAG
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| Protein sequence | MKRVRRLLVI GCLWLPLIAW AKPEALPSVV LEPDQQQWLD THRSLRVGLV LQAPYAQFDR
RLQQLYGANV ELVNSLAQTL RLDLTWRNFT DQGSLEHALQ SGEIDFAPGL TQTPASLRLW
LFSDPYMRVP QLVVGPRTGA MAVELEKLEA EQRVAVRMPS PLADYLRGNY GNLNLQGVPD
DREALQLVVG GQASFAVLDE AQLSRLSRES EFGELAVVGD IGLPQLLRIG SRRDWPMLAD
VLERGLQAVP AKELEQLHQR WLQPKYPRLS ESPGFWQNMA LLFGLLLLCA LATLVWQRRQ
QRQLERSLLA ARESLVERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAAERMLG
YSEGALLERP LSDFEPSLNM DRWLELWKGA RTGAGGVGQF ETQCRRADQS LLPVELSLSF
LRFRDSEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLERD PAEGDLEFPY
ISEGSEALVG YAPSEIQHPQ MGLRNLVHPE DRADYHRVQD LALASDQDWS WQGRILTRQG
EQRWADIKAS ARHLGNGQVV WDGVVWDITQ GKRAELALAK SQEQLRELSA HLESVREEEK
ARIAREVHDE LGQMLTVLKL EVSMCELAYA ELDPGLNDRL ASMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKATGLFR ILQEALTNVM
RHAQAHSVEI ELVREGGQLR MTVSDDGQGF CREQTRPTSF GLVGVRERVL MLGGSMTLES
EPGEGTSLSV AIPLE
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