Gene PP_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0336 
SymbolmsrA 
ID1044038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp402528 
End bp403196 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content64% 
IMG OID637143715 
Productmethionine sulfoxide reductase A 
Protein accessionNP_742503 
Protein GI26987078 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.337081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTGC GTTCGGAAAT CCTGGTGAAC AAAAACGTCA TGCCCACTGC GGAACAGGCC 
CTGCCTGGCC GCGACACGCC AATGAGCCTG CCCGAGTTCC ACTACGTCTT CAAAGACACC
CCACTGCTCG GCCCGTTCTT CGAAGGCGCC ATCGACTTCG CCATCTTCGG CCTGGGCTGC
TTCTGGGGCG CAGAGCGCCG CTTCTGGCAG CGTGAAGGTG TGGTCAGCAC CGTGGTCGGC
TACGCCGGCG GCTTCACCCC GCACCCTACC TACGAAGAAG TCTGCTCGGG CCTGACCGGC
CACACCGAAG TGGTGCTGGT GGTGTTCGAC AAGGACAAGG TCAGCTACCG CGAACTGCTG
GCAATGTTCT GGGAGCTGCA CAACCCCACC CAAGGTATGC GCCAGGGCAA CGACATCGGC
ACCCAGTACC GCTCGGCCAT CTACTGCACC AGCCCGGAAC AGCTGGAACA GGCCAAGGCC
AGCCGCGACG CCTTCCAGGC CGAGCTGAGC AAGGCCGGCT TCGGTGAGAT CACCACCGAA
ATCGACCAGG CACCGACCGT CTATTTCGCC GAGGCCTACC ACCAGCAGTA CCTGGCCAAG
AACCCGGACG GCTACTGCGG CATCGGCGGC ACCGGCGTGT GCCTGCCACC CAGCCTGCAA
GGTAACTGA
 
Protein sequence
MVLRSEILVN KNVMPTAEQA LPGRDTPMSL PEFHYVFKDT PLLGPFFEGA IDFAIFGLGC 
FWGAERRFWQ REGVVSTVVG YAGGFTPHPT YEEVCSGLTG HTEVVLVVFD KDKVSYRELL
AMFWELHNPT QGMRQGNDIG TQYRSAIYCT SPEQLEQAKA SRDAFQAELS KAGFGEITTE
IDQAPTVYFA EAYHQQYLAK NPDGYCGIGG TGVCLPPSLQ GN