Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0336 |
Symbol | msrA |
ID | 1044038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 402528 |
End bp | 403196 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143715 |
Product | methionine sulfoxide reductase A |
Protein accession | NP_742503 |
Protein GI | 26987078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.337081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCTGC GTTCGGAAAT CCTGGTGAAC AAAAACGTCA TGCCCACTGC GGAACAGGCC CTGCCTGGCC GCGACACGCC AATGAGCCTG CCCGAGTTCC ACTACGTCTT CAAAGACACC CCACTGCTCG GCCCGTTCTT CGAAGGCGCC ATCGACTTCG CCATCTTCGG CCTGGGCTGC TTCTGGGGCG CAGAGCGCCG CTTCTGGCAG CGTGAAGGTG TGGTCAGCAC CGTGGTCGGC TACGCCGGCG GCTTCACCCC GCACCCTACC TACGAAGAAG TCTGCTCGGG CCTGACCGGC CACACCGAAG TGGTGCTGGT GGTGTTCGAC AAGGACAAGG TCAGCTACCG CGAACTGCTG GCAATGTTCT GGGAGCTGCA CAACCCCACC CAAGGTATGC GCCAGGGCAA CGACATCGGC ACCCAGTACC GCTCGGCCAT CTACTGCACC AGCCCGGAAC AGCTGGAACA GGCCAAGGCC AGCCGCGACG CCTTCCAGGC CGAGCTGAGC AAGGCCGGCT TCGGTGAGAT CACCACCGAA ATCGACCAGG CACCGACCGT CTATTTCGCC GAGGCCTACC ACCAGCAGTA CCTGGCCAAG AACCCGGACG GCTACTGCGG CATCGGCGGC ACCGGCGTGT GCCTGCCACC CAGCCTGCAA GGTAACTGA
|
Protein sequence | MVLRSEILVN KNVMPTAEQA LPGRDTPMSL PEFHYVFKDT PLLGPFFEGA IDFAIFGLGC FWGAERRFWQ REGVVSTVVG YAGGFTPHPT YEEVCSGLTG HTEVVLVVFD KDKVSYRELL AMFWELHNPT QGMRQGNDIG TQYRSAIYCT SPEQLEQAKA SRDAFQAELS KAGFGEITTE IDQAPTVYFA EAYHQQYLAK NPDGYCGIGG TGVCLPPSLQ GN
|
| |