| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0328 |
|---|
| Symbol | fdhA |
|---|
| ID | 1044027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 394617 |
|---|
| End bp | 395816 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637143707 |
|---|
| Product | formaldehyde dehydrogenase, glutathione-independent |
|---|
| Protein accession | NP_742495 |
|---|
| Protein GI | 26987070 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.225321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGCA ATCGTGGAGT GGTGTATCTC GGCGCTGGCA AGGTCGAAGT ACAGAAGATC
GACTACCCGA AAATGCAGGA CCCGCGCGGC AAGAAAATCG AACACGGCGT CATCCTGAAG
GTGGTCTCCA CCAACATCTG CGGTTCTGAC CAGCACATGG TCCGTGGCCG CACTACTGCC
CAGGTCGGCC TGGTCCTGGG CCACGAAATC ACCGGTGAAA TCGTCGAGAA GGGCCGCGAC
GTCGAGCGCA TGCAGATCGG CGACCTGGTA TCGGTCCCGT TCAACGTCGC CTGCGGCCGC
TGCCGCTCCT GCAAAGAGAT GCACACCGGT GTCTGCCTCA CCGTCAACCC GGCCCGCGCC
GGCGGTGCCT ACGGCTACGT CGACATGGGC GACTGGACCG GTGGCCAGGC CGAATACGTG
CTGGTGCCAT ACGCCGACTT CAACCTGCTG AAGCTGCCTG AGCGCGACAA GGCCATGGAA
AAGATCCGTG ACCTGACCTG CCTGTCCGAC ATCCTGCCCA CCGGCTATCA CGGTGCCGTG
ACTGCTGGCG TTGGTCCAGG CAGCACTGTC TACGTTGCCG GTGCTGGCCC GGTCGGCCTG
GCCGCCGCTG CCTCGGCGCG CCTGCTGGGC GCCGCCTGTG TAATCGTCGG TGACCTGAAC
CCGGCCCGCC TGGCCCACGC CAAGTCGCAA GGCTTCGAAG TGGTCGACCT GTCCAAGGAC
ACCCCGCTGC ACGAGCAGAT CGTCGACATT CTCGGCGAGC CGGAAGTGGA CTGCGCTGTC
GACGCCGTCG GCTTCGAGGC CCGTGGCCAT GGCCACGAAG GTGCCAAGCA CGAGGCCCCG
GCCACCGTGC TGAACTCGCT GATGCAAGTG ACCCGCGTGG CCGGCAACAT CGGTATCCCG
GGCCTGTACG TGACCGAAGA CCCGGGCGCG GTGGATGCCG CTGCCAAGAT CGGCGCGCTG
AGCATCCGCT TCGGCCTGGG CTGGGCGAAA TCGCACAGCT TCCACACCGG CCAGACCCCG
ACCATGAAAT ACAACCGCCA GCTGATGCAG GCGATCATGT GGGACCGCAT CAACATTGCT
GAAGTGGTAG GTGTGCAGGT GATCAACCTG GATCAGGCGC CGGAAGGGTA TGGCGAGTTT
GATGCAGGTG TGCCGAAGAA ATTCGTTATC GACCCGCACA AAATGTGGGG TGCGGCGTAA
|
|---|
| Protein sequence | MSGNRGVVYL GAGKVEVQKI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA
QVGLVLGHEI TGEIVEKGRD VERMQIGDLV SVPFNVACGR CRSCKEMHTG VCLTVNPARA
GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPERDKAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AACVIVGDLN PARLAHAKSQ GFEVVDLSKD
TPLHEQIVDI LGEPEVDCAV DAVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGNIGIP
GLYVTEDPGA VDAAAKIGAL SIRFGLGWAK SHSFHTGQTP TMKYNRQLMQ AIMWDRINIA
EVVGVQVINL DQAPEGYGEF DAGVPKKFVI DPHKMWGAA
|
|---|
| |