Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0301 |
Symbol | |
ID | 1043992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 362034 |
End bp | 362504 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637143680 |
Product | hypothetical protein |
Protein accession | NP_742468 |
Protein GI | 26987043 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.569297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000678034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCTC TGATCACCTA CCGCACCACG GTCCAGGAGG ACTGGGTCGA TTACAACGGC CACCTGCGCG ATGCCTTCTA CCTGCTGATC TTCAGCTACG CCACCGATGC TCTGATGGAC CGCATCGGCC TGGACGCCGA TAGCCGCGGG CAAAGCGGTA ACTCGCTGTT CACGCTGGAG GCGCATATCA ATTATTTGCA CGAGGTGAAG CTGGGCACCG AGGTGTGGGT GCAGACACAG ATCCTCGGCT TTGATCGCAA GCGTCTTCAC GTGTATCACA GCCTGCACCG GGCAGGGTTC GACGAGGTGC TGGCGGCAAG CGAGCAGATG TTACTGCACG TGGACCTGGC GGGGCCGCAG TCAGCACCTT TTGGGCACAC GACTGTTTGC CGGTTGAATC ACTTGGTAGA GCAACAGGAG GGTGCGCAGG CGCCGCAATA TATGGGGCGT ACGATAAAAC TTCCTGCTTG A
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Protein sequence | MPALITYRTT VQEDWVDYNG HLRDAFYLLI FSYATDALMD RIGLDADSRG QSGNSLFTLE AHINYLHEVK LGTEVWVQTQ ILGFDRKRLH VYHSLHRAGF DEVLAASEQM LLHVDLAGPQ SAPFGHTTVC RLNHLVEQQE GAQAPQYMGR TIKLPA
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