Gene PP_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0301 
Symbol 
ID1043992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp362034 
End bp362504 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID637143680 
Producthypothetical protein 
Protein accessionNP_742468 
Protein GI26987043 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.569297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000678034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCTC TGATCACCTA CCGCACCACG GTCCAGGAGG ACTGGGTCGA TTACAACGGC 
CACCTGCGCG ATGCCTTCTA CCTGCTGATC TTCAGCTACG CCACCGATGC TCTGATGGAC
CGCATCGGCC TGGACGCCGA TAGCCGCGGG CAAAGCGGTA ACTCGCTGTT CACGCTGGAG
GCGCATATCA ATTATTTGCA CGAGGTGAAG CTGGGCACCG AGGTGTGGGT GCAGACACAG
ATCCTCGGCT TTGATCGCAA GCGTCTTCAC GTGTATCACA GCCTGCACCG GGCAGGGTTC
GACGAGGTGC TGGCGGCAAG CGAGCAGATG TTACTGCACG TGGACCTGGC GGGGCCGCAG
TCAGCACCTT TTGGGCACAC GACTGTTTGC CGGTTGAATC ACTTGGTAGA GCAACAGGAG
GGTGCGCAGG CGCCGCAATA TATGGGGCGT ACGATAAAAC TTCCTGCTTG A
 
Protein sequence
MPALITYRTT VQEDWVDYNG HLRDAFYLLI FSYATDALMD RIGLDADSRG QSGNSLFTLE 
AHINYLHEVK LGTEVWVQTQ ILGFDRKRLH VYHSLHRAGF DEVLAASEQM LLHVDLAGPQ
SAPFGHTTVC RLNHLVEQQE GAQAPQYMGR TIKLPA