| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0274 |
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| Symbol | |
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| ID | 1043873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 333189 |
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| End bp | 333728 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637143651 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | NP_742441 |
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| Protein GI | 26987016 |
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| COG category | [K] Transcription |
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| COG ID | [COG5499] Predicted transcription regulator containing HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000135828 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGCAGA AGCGATATCA GGTAGCAACC TGGGCCGCGC GATATTTCAA TTCGACAGGT
GACAACATGA AGCGGGATAA AATCGAAGCC AATGGACTAG ATGCCTTCAT CGCTAATATT
TCACCCATGC TCGATGGCCT GAACACTCAG ATGGCAACCA TGGCCCAGCT TCTAGCCGCC
TGCCATGACC CCATCAAGGA CGATGCCGAG CTTGAGGCAC GCATGGCCTT GATCGACGAG
CTCTACTCCC ATGCGGACAG CGAAGGCCAC GCTGCGGCAC GCTTTGCCGA GATGGTAGCG
GACCGCGTCT ACGAGTATGA GAGTGAGTCT GTATTGGTGC CGTTCGCGAG CCAGGCCGAA
GCGTTGGCCT TTCTGCTGTC GGATAGGGGC GTGAAGCAGA AGGACCTGTC GGCGATAGCG
ACCCAGAGCG CGGTATCCGA GATTCTGAAC AACAAGCGGA AGATGACGGT TGCCCAGATA
AAGGGCTTTG CTGAGTTTTT CAGCGTACCG GTTGAGTTCT TCATGCATGG GGTGGTTTGA
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| Protein sequence | MVQKRYQVAT WAARYFNSTG DNMKRDKIEA NGLDAFIANI SPMLDGLNTQ MATMAQLLAA
CHDPIKDDAE LEARMALIDE LYSHADSEGH AAARFAEMVA DRVYEYESES VLVPFASQAE
ALAFLLSDRG VKQKDLSAIA TQSAVSEILN NKRKMTVAQI KGFAEFFSVP VEFFMHGVV
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