| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0179 |
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| Symbol | |
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| ID | 1043705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 230339 |
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| End bp | 231757 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637143557 |
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| Product | RND efflux transporter |
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| Protein accession | NP_742348 |
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| Protein GI | 26986923 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TGATCCTGGC TGGCCTGTGC CTGTCGCTGG GGGCCTGCAT GATGGTGGGG
CCCGACTATG AGGTGCCTGG GGATGCGGCC GTGCAACGCA ATGACCTGAA CGGCCCGCTG
CGCCAGGATG CCGACAGCGT CGTGTCAGCG CCGGTCCCCG AGGACTGGTG GCAGCTGTAT
CAGGATCAGC GGCTGAACGA GCTGGTGCGT CAGGCGCTGA GTGCCAACAC CGAACTGCGC
GTGGCGGCAG CCAACATTGC CAAAGCTCGC GCTCAGGTGG AGGTGGCTGA ATCGCAAGGC
GGCTTCAACG GTGGCGTCAA ACTCGGCGCT CAGCGCTTGC AGGAGTCGGG CGAAGCCTTC
CTGCAGCCCG AGAAGGTGCC GGTAGCCAAC ATCGGTGAGG CCATCATCAG TGCTTCGTAC
CAGTTCGACC TGTGGGGCAC CTTCAAGCGT GGTACCGAGG CTGCCAAGGC AAATGCCGAC
GCGGTGCAGG CCGCTGCCGA CACTGCCCGC ATCACGCTTG TGGCGGACGT GGTCAAGGCT
TATACCCAGG TGTGCTCGGC CAACGAGGAA TACCACATTG CCCGTGAGTC CCTCGATTTG
CAGGAGCAAA GCGTGAAACT CAACCAGCGC CTGCGCGATG CTGGGCGTGG CGATGAAACC
CAGGTCACTC GCTCGCAGAC CCAGTTCAAA TCCTTGCGTG CAGAACTGCC ACGCTTCAAG
GCCGAACGCG AGACGGGCAT GTACACCCTG GCCGCGCTGC TGGCCAAGCC GGTCGACCAG
TTGCCTGCCG GTACCGCCGA TTGTGCCGAG TTGCCGCACC TGAACCAGCT GGTTCCTGTG
GGCGATGGCG CGGCCCTGCT CAAGCGCCGC CCCGACGTGC GCCAGGCCGA ACGCCAGCTG
GCTGCCGCCA CCGCCTATAT TGGCGTGGCT ACCGGCGCGT TGTACCCGGA TATCAGCATT
GGCGCCCAGG TTGGCACCAT CGGCATCCTG GAGAACCTTG GCGAGCCTTC GACCAACCGC
TGGGGCTTTG GCCCGCAGAT CAGCTGGAGC ATCCCCACCA ACGGCACCCG TGCCCGCATT
CGCATGGCCG AGGCCTCGAC CCAGGCGGCC CTGGCGCACT TCGATGGCGT GGTGCTGAAC
GCCATTCGCG AGACCCAGAC CCGGCTGGCA CAGTACAGCG CCTTGCTCGA TCGGCGCGAT
GCGCTGGCCG AGGCGGAGAA GTCGGCGAAG GAAGCCGCGG ACCAGACGCA CCGGTATTAC
CAGGCAGGGC GTGAGTCGTT CCTGGCGGAT TTGCAGGCCA CGCGAACCTA CACCGATATG
CGTGCGCAGT TGGCTGCAGC CAATAGTCAA GTGGCGCAGG GGCAAATTGC CGTGTTCCTG
GCGTTGGGTG GGGGTTGGAA GGGCACCGCC AAGCCCTGA
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| Protein sequence | MKQLILAGLC LSLGACMMVG PDYEVPGDAA VQRNDLNGPL RQDADSVVSA PVPEDWWQLY
QDQRLNELVR QALSANTELR VAAANIAKAR AQVEVAESQG GFNGGVKLGA QRLQESGEAF
LQPEKVPVAN IGEAIISASY QFDLWGTFKR GTEAAKANAD AVQAAADTAR ITLVADVVKA
YTQVCSANEE YHIARESLDL QEQSVKLNQR LRDAGRGDET QVTRSQTQFK SLRAELPRFK
AERETGMYTL AALLAKPVDQ LPAGTADCAE LPHLNQLVPV GDGAALLKRR PDVRQAERQL
AAATAYIGVA TGALYPDISI GAQVGTIGIL ENLGEPSTNR WGFGPQISWS IPTNGTRARI
RMAEASTQAA LAHFDGVVLN AIRETQTRLA QYSALLDRRD ALAEAEKSAK EAADQTHRYY
QAGRESFLAD LQATRTYTDM RAQLAAANSQ VAQGQIAVFL ALGGGWKGTA KP
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