Gene PP_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0116 
Symbol 
ID1043607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp122250 
End bp122957 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID637143488 
Productputative lipoprotein 
Protein accessionNP_742286 
Protein GI26986861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT TCGCCTCCCG TTATCTGCTT GTTGCCGCGT TTTCCCTGAT CCTGGCTGCC 
TGTTCCAATG CGCCGGTCGA ACAGGCCACC GCACCTGCTC AAGCAGATGC CTGGCAGCAG
TTGCAACAGA ACATCGCCAG CAACGAGCTG GCTACCGCCG AAGACCAGCT TGCAGCTCTG
CAGGCCCAGT CGCCGGATGA TGCACGCCTG GAACAATACC AGCGCCAACT GGCCGAAGCT
TACCTGCAAC GTAGCCAGAT CGTCCTGCAG AAGGGCGATG TGAACGCGGC AGCTACCGCG
CTGGCCCGTG CCCGGGCCCT GATGCCGCAG GCGCCAGCGG TCACTGGCGG GGATGCCGTG
ACCCAGGCTC GCAAGGCCGA GCTGGAAAAG GCTGAAGCGG CGCTGAAAGC CGCCGAAGCC
AAGCCCGAGG CACGCATCAT CGACCCGACA GCGCCAAGTA CCGTGGTGGC CTTGAAGACC
ACTGACAGCC GTGCGCTGCG CCGCCAACTG GACGACATTG CCGCCGATGT GGTGAGTTAC
CAGTGTGAGG TGGTATTCCA GGTACCGCGC ACCGAGGATG CGCCTTGGCT GAAGACTTTG
CTGGAAAAGC GCGTGCGCAA GATTGACAGT GGGTTCGAGC TGAAGCAGAA GCATCAGATC
CAGCGCTCGC TGCCGGCACA GGTGGTGCTG GTCCCGCATC AGCAGTAA
 
Protein sequence
MKPFASRYLL VAAFSLILAA CSNAPVEQAT APAQADAWQQ LQQNIASNEL ATAEDQLAAL 
QAQSPDDARL EQYQRQLAEA YLQRSQIVLQ KGDVNAAATA LARARALMPQ APAVTGGDAV
TQARKAELEK AEAALKAAEA KPEARIIDPT APSTVVALKT TDSRALRRQL DDIAADVVSY
QCEVVFQVPR TEDAPWLKTL LEKRVRKIDS GFELKQKHQI QRSLPAQVVL VPHQQ