Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0116 |
Symbol | |
ID | 1043607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 122250 |
End bp | 122957 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143488 |
Product | putative lipoprotein |
Protein accession | NP_742286 |
Protein GI | 26986861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT TCGCCTCCCG TTATCTGCTT GTTGCCGCGT TTTCCCTGAT CCTGGCTGCC TGTTCCAATG CGCCGGTCGA ACAGGCCACC GCACCTGCTC AAGCAGATGC CTGGCAGCAG TTGCAACAGA ACATCGCCAG CAACGAGCTG GCTACCGCCG AAGACCAGCT TGCAGCTCTG CAGGCCCAGT CGCCGGATGA TGCACGCCTG GAACAATACC AGCGCCAACT GGCCGAAGCT TACCTGCAAC GTAGCCAGAT CGTCCTGCAG AAGGGCGATG TGAACGCGGC AGCTACCGCG CTGGCCCGTG CCCGGGCCCT GATGCCGCAG GCGCCAGCGG TCACTGGCGG GGATGCCGTG ACCCAGGCTC GCAAGGCCGA GCTGGAAAAG GCTGAAGCGG CGCTGAAAGC CGCCGAAGCC AAGCCCGAGG CACGCATCAT CGACCCGACA GCGCCAAGTA CCGTGGTGGC CTTGAAGACC ACTGACAGCC GTGCGCTGCG CCGCCAACTG GACGACATTG CCGCCGATGT GGTGAGTTAC CAGTGTGAGG TGGTATTCCA GGTACCGCGC ACCGAGGATG CGCCTTGGCT GAAGACTTTG CTGGAAAAGC GCGTGCGCAA GATTGACAGT GGGTTCGAGC TGAAGCAGAA GCATCAGATC CAGCGCTCGC TGCCGGCACA GGTGGTGCTG GTCCCGCATC AGCAGTAA
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Protein sequence | MKPFASRYLL VAAFSLILAA CSNAPVEQAT APAQADAWQQ LQQNIASNEL ATAEDQLAAL QAQSPDDARL EQYQRQLAEA YLQRSQIVLQ KGDVNAAATA LARARALMPQ APAVTGGDAV TQARKAELEK AEAALKAAEA KPEARIIDPT APSTVVALKT TDSRALRRQL DDIAADVVSY QCEVVFQVPR TEDAPWLKTL LEKRVRKIDS GFELKQKHQI QRSLPAQVVL VPHQQ
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