Gene PP_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0107 
Symbol 
ID1043593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp113072 
End bp114073 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID637143479 
Producthypothetical protein 
Protein accessionNP_742277 
Protein GI26986852 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.481565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCTT CAGAAAGGGG CGTGGGAGAC CAGTTGACCG CTGATCAAGC CCCAGGCGAC 
CAGGCCTATT GTCAAGGCCG CCAGAGTCAC CCGTACGGTC AGGGCCTTGA GCAGGCGGGT
CGAGTTTTCA TCATCCTTGA CCAGAAACAC CAGGCCACTG AACAGGCTGG CAATCGTGGC
CAACAGCATC AGGACAATCG CGGCCTTGAG CATGGCGTCA CTCCGGGGGG ATGCGGTGAT
GTGGATAAGT ATAGCGAGGC GCTCGTGAGG CCGTTTCGCC CAGGCTGGGT ACCGACGCTG
GCGGTGCTTG CACTGCTGCC GGGACTGATT ACGCTTGGTT GCTGGCAACT CGGCCGTGCC
GAGGAAAAGC GCGTGCTGCT GGCCACCTAT GCAGAACGGC GGATTGAAGC GCCGATAGCC
ACCGCCCAGC TCTTCTCGAA AGAAGACAAC GCCTTCCGCC GCGTGCACCT GTATGGCCGC
TTCGACGCCG AGCACAGCGT GCTGCTGGAC AACCGCATGC GCGACGGCAA AGCCGGTGTC
GAGCTGCTGC AGCCCTTCCA CGACCAAGCC AGCGGCCTGT GGTTGCTGAT CAATCGTGGC
TGGCTGCCAT GGCTGGACCG CCGGGTGCCG GTGCACTTCG AAACCCCTGC CCAGGCCTTG
GCGCTGGATG CCTCTGTGTA TGTCGCGCCC GGTAGCACCT TCCAACTGCA CCCGGACCCC
ATCGGCGGGC AATGGCCGCA TCTGTTGACC GCTATCGATG CCGCGCAGCT ATGGCAACAG
CTTGATCGCG AAGGCTTCGC CCAGGAATTG CGCCTGGAGC CGGGCCCTGC GAGCTATCGC
CTGGACTGGC CGGTTGTCGC CATGAGCCCC GAAAAACACG TCGGCTATGC CGTGCAGTGG
TTTGCCCTGG CTACCGCTCT GGTTCTGCTC TACCTCTACT TCGGCTGGCA TCAAAACAAG
GAGAAACGCC ATGGCCACCG CCACGCCACT GGACGCGCCT GA
 
Protein sequence
MSASERGVGD QLTADQAPGD QAYCQGRQSH PYGQGLEQAG RVFIILDQKH QATEQAGNRG 
QQHQDNRGLE HGVTPGGCGD VDKYSEALVR PFRPGWVPTL AVLALLPGLI TLGCWQLGRA
EEKRVLLATY AERRIEAPIA TAQLFSKEDN AFRRVHLYGR FDAEHSVLLD NRMRDGKAGV
ELLQPFHDQA SGLWLLINRG WLPWLDRRVP VHFETPAQAL ALDASVYVAP GSTFQLHPDP
IGGQWPHLLT AIDAAQLWQQ LDREGFAQEL RLEPGPASYR LDWPVVAMSP EKHVGYAVQW
FALATALVLL YLYFGWHQNK EKRHGHRHAT GRA