| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0103 |
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| Symbol | |
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| ID | 1043588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 108809 |
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| End bp | 109936 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143475 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | NP_742273 |
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| Protein GI | 26986848 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.193198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCGAC ATCCACATGT CTGGATGGGC CTCCTGTTGT GGTCGGTTTT TGGTCAGGCC
AACGCCGCCT GGACCGTGAA CATGCACCCA GGGGCGACGG AAGTCTCCAA CGCCGTCTTC
GACCTGCACA TGACCATCTT CTGGATCTGC GTGATCATTG GCATCGTGGT GTTTGGCGCG
ATGTTCTGGT CGATGGTCAT CCACCGCCGC TCCACTGGCC AGCAGGCCGC GCATTTCCAC
GAGCACACGT GGGTGGAAAT TCTCTGGACG GTGGTGCCCT TCCTGATTCT GGTGGTGATG
GCCATTCCGG CTACCAAGAC CCTGATCGAC ATCTATGACG CCAGCGAGTC GGACATCGAC
GTCCAGGTCA CCGGCTACCA GTGGAAATGG CACTACAAAT ACCTGGGCCA GGACGTGGAG
TTCTTCAGCA ACCTGGCCAC CCCCACCGAC CAGATCCACA ACAAGGCGCC AAAGGATGAG
CACTACCTGC TGGAAGTCGA CCAGCCGCTG GTGCTGCCGG TGGGCGCGAA AGTGCGCTTC
CTGGTCACTG CTGCCGATGT GATCCACTCC TGGTGGGTGC CGGCCTTCGC GGTCAAACGC
GACGCCATCC CAGGCTTTGT CAACGAAGCC TGGACCCGGA TCGAAAAGCC AGGCATCTAC
CGCGGCCAGT GCACCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGGT GGTGGTCGAG
GTCAAGTCCA AGGCGGATTA CGACACCTGG CTTGGCGAGC GCAAGGCTGA AGCCGCCAAG
CTCAAGGAGC TGACCAGCAA GGAATGGACC CTGGAAGAGC TGGTGGAGCG CGGCGACAAG
GTCTACCACA CCACCTGCGT GGCCTGTCAC CAGGCCGAAG GCCAGGGCCT GCCGCCAATG
TTCCCGGCGC TCAAAGGCTC GAAGATTGCC ACCGGGCCGA AGGAAGGCCA CCTGAGCATT
GTCTTCCATG GCAAGCCCGG CACGGCCATG GCCGCTTTCG GCAAGCAGCT GTCGGAAGTC
GACATCGCTG CTGTAGTCAC CTACGAGCGC AATGCCTGGG GCAACAACAA AGGCGACATG
GTGACGCCGA AGGACGTGCT GGCGCTGAAG CAGGCAGAAG CCAAGTGA
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| Protein sequence | MMRHPHVWMG LLLWSVFGQA NAAWTVNMHP GATEVSNAVF DLHMTIFWIC VIIGIVVFGA
MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPFLILVVM AIPATKTLID IYDASESDID
VQVTGYQWKW HYKYLGQDVE FFSNLATPTD QIHNKAPKDE HYLLEVDQPL VLPVGAKVRF
LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRIEKPGIY RGQCTELCGK DHGFMPVVVE
VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVERGDK VYHTTCVACH QAEGQGLPPM
FPALKGSKIA TGPKEGHLSI VFHGKPGTAM AAFGKQLSEV DIAAVVTYER NAWGNNKGDM
VTPKDVLALK QAEAK
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