| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3456 |
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| Symbol | def-2 |
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| ID | 2686601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3803386 |
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| End bp | 3803895 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637128151 |
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| Product | polypeptide deformylase |
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| Protein accession | NP_954496 |
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| Protein GI | 39998545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGCAC AGACCATACT GCAGTATCCC CATCCCGTCC TGAAGAAGGT ATGTCATACT
GTCACGGCCA TCGACGAGGC CATCAGGGGG CTGATCGACG ACCTGATCGA GACCATGCGT
GAAGGTCCCG GCTCCGTGGG CGTTGCCGCC CCCCAGATCG GCGTCACCTT GCGGGTCTGC
GTCATTGACG TCTCGGGCAG CCGCCACGGC AAGGACAACA ACCACGGGCT GCTCCTCATG
GTCAACCCGG AGATCGTTGA CCGGTCGGGC AATGCGGTCA TGCGCGAAGG ATGCATGAGC
GTCCCCGACT ACACGGGAGA CGTGGAGCGC TCCACCGAGG TCCGGGTCCG CTTCCTGGAC
GGCGCGGATG GCTCGGAGCG GGAGATCACG GCCTCCGGCT TCGAGGCCGT CGCAATCCAG
CACGAGATGG ACCACTTGGA CGGCATCCTG TTCCTCGACC GGATTGTCTC GATCAAAACG
GGCCTCTTCC GGCGGAAAAA TTATAAGTAA
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| Protein sequence | MPAQTILQYP HPVLKKVCHT VTAIDEAIRG LIDDLIETMR EGPGSVGVAA PQIGVTLRVC
VIDVSGSRHG KDNNHGLLLM VNPEIVDRSG NAVMREGCMS VPDYTGDVER STEVRVRFLD
GADGSEREIT ASGFEAVAIQ HEMDHLDGIL FLDRIVSIKT GLFRRKNYK
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