| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3446 |
|---|
| Symbol | |
|---|
| ID | 2688144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3791654 |
|---|
| End bp | 3792106 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637128141 |
|---|
| Product | thioredoxin family protein, selenocysteine-containing |
|---|
| Protein accession | NP_954486 |
|---|
| Protein GI | 39998535 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.238909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGA GCGGCCAGTC ATTTCTCGTT GCCTGCCCCG CCTGTGGCAC GAGCAACCGG
GTGCCGGCAT CCAGGGAAGG GGTTGCGGGC CGCTGCGGCA GCTGCCGCGG TGTGCTCCCG
CCCCTCTATT TCCAGCCGGT CCCGCTTACC GACCGGAGTT TCGACCCGTT CGTCGCTGGC
TATCATGGCC CCGTTCTGGT TGAATTCTGG GCCCCCTGGT GACCCCACTG CCGGGACTTC
GCACCGGTGG TGCGGGAGGT TGCGCGGGAG CTTGCCGGCA CGGCGGCAGT GGTTCAGGTG
AACACCCAGG AGAACCCGCA GCTGGCAGCC CGCTTCGGCA TCCGGGGGAT TCCGGCCCTG
GTGCTCCTGC GACGGGGGCA GGTGCTCGCA ACCTGGAGCG GTGCACTACC CAGAGAGGCG
GTGCTTTCCC GGGTCCGCGA TGCCCTGCGC TAA
|
|---|
| Protein sequence | MAESGQSFLV ACPACGTSNR VPASREGVAG RCGSCRGVLP PLYFQPVPLT DRSFDPFVAG
YHGPVLVEFW APWUPHCRDF APVVREVARE LAGTAAVVQV NTQENPQLAA RFGIRGIPAL
VLLRRGQVLA TWSGALPREA VLSRVRDALR
|
|---|
| |