| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3392 |
|---|
| Symbol | |
|---|
| ID | 2686286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 3729621 |
|---|
| End bp | 3730391 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637128087 |
|---|
| Product | branched-chain amino acid ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_954432 |
|---|
| Protein GI | 39998481 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTTC TGAAACTCGA TAACGTAACC ATCCGCTTCG GCGGTCTGGT GGCCGTCGAC
AGCGTCAACC TGACGGTGGA GCAGGGGGAG ATCCTGGCGC TCATCGGTCC CAACGGCGCC
GGCAAGAGCA CCCTGTTCAA CCTCATTACC GGTATCTATA CGCCGACGGC GGGGAGCATT
GCCTTCAAGG GTGAGACCAT CAGCGGCCGG AAGACGTACC GCATCGCCGC CGCCGGCATC
GGCCGCACCT TTCAGAATAT CCGGCTGTTC CCCGAGCTGT CGGTTCTGGA GAACGTCCTG
ATCGGCGCCC ACACCCGCGG GAAATGGGAC CTGACCGGTT CCATCCTGAA GCTGGCCCCC
TGGGTGCGGC GCGAAGAGGG CGAACTCGCC GAATGGGCCA TTGAATGCCT CAAACAGGTC
GACCTGGCGC ATCGGGCCTA TGAACCTTCC ACGAGCCTTC CCTATGGCGA ACAGCGTCGC
CTGGAGATCG CGCGTGCTCT GGCAATCAAG CCCGACCTGA TCCTGCTGGA CGAGCCGGCC
GCTGGCATGA ACCCTCAGGA AAAGCAGGTC CTGCTGGAGA TGGTGCGGAA GATCCGCGCC
ACCGGCATCA CGGTCTTCCT CGTGGAGCAC GACATGAAGT TTGTCATGGG GCTGTCCGAC
CGGATCGCCG TGCTCGATTA CGGCGTCAAG ATCGCCGAGG GAAAACCCGA AGAAATCCGG
GCCAACCCGC AGGTCATCGA GGCGTACCTC GGCAAGGCGG CCGTCCACTA G
|
|---|
| Protein sequence | MSLLKLDNVT IRFGGLVAVD SVNLTVEQGE ILALIGPNGA GKSTLFNLIT GIYTPTAGSI
AFKGETISGR KTYRIAAAGI GRTFQNIRLF PELSVLENVL IGAHTRGKWD LTGSILKLAP
WVRREEGELA EWAIECLKQV DLAHRAYEPS TSLPYGEQRR LEIARALAIK PDLILLDEPA
AGMNPQEKQV LLEMVRKIRA TGITVFLVEH DMKFVMGLSD RIAVLDYGVK IAEGKPEEIR
ANPQVIEAYL GKAAVH
|
|---|
| |