| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3356 |
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| Symbol | |
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| ID | 2686419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3685627 |
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| End bp | 3687228 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637128050 |
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| Product | GGDEF domain/HAMP domain-containing protein |
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| Protein accession | NP_954396 |
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| Protein GI | 39998445 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.204674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACGAG CAAGCCTGAA AACCAAAACA GCCCTCTTTG TGCTCCTCGT CTTCTTTACC
ACGGCTCCCA CTGCGGTCTA CCTGACACTT GAGTTCTTCG GAAGGTCGCT GCGGGACGTG
GTGAATACCC ACCAGGCGAC CCTGCTGGCT CGAATCGGCG CTGAAATTGA CGAAAAGCTC
CAGGGCAGCC ATGACGCCCT CATAAATGTC GCTCGCATGG CCACTGCCGA CGACGTGACG
TCCCCCGAGA GCGCCCGGCG CTTTCTTCAT CGCTATCCCC TGCTGGCGGC ATTCTTCGAC
AACGGCGTGT TCGTGTTCAC GCCCGCCGGA ATCTTGATGG CCGAGACTAA TCAGGGGTTG
CAGCGAACCG GCCTCGACTT CTCCGCCCGC GAGTACATCC GGCAGACCAG GATCTCGGAG
CGCCCCTACA TCTCGAGGCC CTTCGTGTCG AGCCAGCCCC ACCACCATCC CACCGTCATG
TTCACTGCCC CGGTCTTTAC GCCGAACGGA ACCCTCGTTG CCATTCTCGG GGGGAGCATG
GATCTGCTCA AGGGGAATTT CATCGGCTCC CTTGCCTCAA CCCGCATCGG CAAGGGAGGT
CACTTTTACC TGTTTGCCGA CGACGGCGTC CTGATCATGC ATCCCCAACG GGAAAATATC
CTGCAGCAGA ACGTCAGCTC GGAGGTTCTG AACCACGCAT CCTCCGTGCC CCGAGGAGGC
GTCATCTCGG CCGAAACGGT CAGCGACGGC ACCCCCATGC TGAGTACCCT GAAAAAGCTG
AGCCAGACGA CATGGACCCT GGCGGCCGAC CTGCCGAAGG ACGAGGCCTA TGCGCCGCTC
CGCATGGCGG AGCGTTCGGC ATGGGCGGCC ATCATCCCGT GGGGACTCTT GAGCGTCGCG
GCCATCTGGC TTCTCATGCG CCGGCTGACA CTGCCGATCC TCGCGCTGGA GTGCCAGATT
CGCGAGGCCG AGGACAGCGG TGCCCACCGC AACGTGCTGA TCCGTTCGGG GGACGAGATC
GAACGGGTGG CCGAGGCATT CAACGGCCTC GTCAACCGGC TCATCGAGAA GGAAGACCGG
CTCGTCCACC TCTCCAACCA CGACTCCCTG ACCGGGCTCT ACAACCGCCT CTTTTTCGAG
GCGGAGATGC AGCGGATCGA CCGGGGACGG CATTTCCCCG TAAGCATGGT GATGGTTGAC
GTGGACAATC TGAAAACGGT CAACGACACC TTCGGCCACA CGGCGGGCGA TGCTCTCATC
ATCAAGGCGG CCCAGGCCCT GCGGGCGGCA TTCCGGTCCG AAGACGTGGT GGCGCGGGTC
GGCGGCGACG AGTTCGCCGT CATCATGGAG GGATCCGACC ACGAAACGGC GCTGGAGGCA
CTGGAACGTG TCCGGGAAAC CGTAGCGCTG CTCAACTCCG ACGGAGATTC TCCCGAACTA
GCCCTCTCGC TGGGCACCGC CACGGCCACG GCACCGCTCA CCCTCGGACA AAGCTGGCGC
CTGGCGGACC AGCGCATGTA TGCCGACAAG GCGCGACGCA AGGCATCAAA GATAATCGGA
AGCGGCTCCG CTTCCCGTGA TTCGGCCGTT TCGGCCTCCT GA
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| Protein sequence | MRRASLKTKT ALFVLLVFFT TAPTAVYLTL EFFGRSLRDV VNTHQATLLA RIGAEIDEKL
QGSHDALINV ARMATADDVT SPESARRFLH RYPLLAAFFD NGVFVFTPAG ILMAETNQGL
QRTGLDFSAR EYIRQTRISE RPYISRPFVS SQPHHHPTVM FTAPVFTPNG TLVAILGGSM
DLLKGNFIGS LASTRIGKGG HFYLFADDGV LIMHPQRENI LQQNVSSEVL NHASSVPRGG
VISAETVSDG TPMLSTLKKL SQTTWTLAAD LPKDEAYAPL RMAERSAWAA IIPWGLLSVA
AIWLLMRRLT LPILALECQI REAEDSGAHR NVLIRSGDEI ERVAEAFNGL VNRLIEKEDR
LVHLSNHDSL TGLYNRLFFE AEMQRIDRGR HFPVSMVMVD VDNLKTVNDT FGHTAGDALI
IKAAQALRAA FRSEDVVARV GGDEFAVIME GSDHETALEA LERVRETVAL LNSDGDSPEL
ALSLGTATAT APLTLGQSWR LADQRMYADK ARRKASKIIG SGSASRDSAV SAS
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