Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU3307 |
Symbol | hisZ |
ID | 2688239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 3631136 |
End bp | 3632452 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637127999 |
Product | ATP phosphoribosyltransferase regulatory subunit |
Protein accession | NP_954347 |
Protein GI | 39998396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0107405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTCCGA TAACCCCCAT AGAAGCCCCC CTTCCCAAGG GGGTTACAGA CTTTCTCCCT GAAAAAGCCG ACAAGATCGG CTACATCGAG GGCAAAATCC GCAAAGTCTT CGAACTCTGG GGGTTCCGGC GGATCATCAC GCCGCTCCTG GAGTTTGAAG ACGTCATTGC CGCCGGACTC GGCGACGACC TGAAGGCAAA AACCTTTCGC TTCGATGACC GCCAAAGCGG CAAACTGATT GCCGTTCCTT CCGACATCAC TCCCCAGATT GCCCGCATCG TAGCAACTCG GCTGAGAGGC TACCCCCTGC CCCACCGCAT CTGCTACAGC GGTAGGGTGT TGCGTCACGC GGAACTCCAG TCGGGCCGGA GCCGCGAGAT CTTCCAGTCG GGCGTAGAAC TCATCGGCCT CGACTCACCC GAAGCGGACG CCGAAATGGT GACCATGGCG GTGGAAGCCC TCAAGGGACT CGGGTTCAGA GACTTCAAGA TCGACCTGGG ACACGTGGGA TTCATTCGGG GAATCATGAC GGCATCCGGG CTCGAAGTGG CGGTACGCAA CCGGCTTCAG GAGGCCATCG GCAAGAAGGA CGTGTCTGCG GTCAGGTCGA TCCTGGCGGA GTCGCCCCTC TCTGATGCGG CAAAGGATGA ACTGGCCGCC CTTCCCCGCC TGTTCGGCGG CCGCGAGGTG CTGGACGAAG CCGGACGCGT GGCGACCAAC GACACGTCGC GCCGGGCACT GGACAACATC TCGCAGGTTC TGGACTTACT CGATATTCAT GGAGTTTCAG ATCATTTGAC CATTGATCTG GGCGAAGTTC GCGGGCTTGA CTACCATACC GGCCTCACCT TCGAAGGCTT CGTGACCGGC ATGGGCGAGG CCGTCTGCAG CGGCGGCCGC TACGACACGC TCACGGCACG CTACGGTTTT CCGGCGCCGG CCACGGGCTT CACCTTCAAC GTTCTGGCGC TCCTGTCGGC CCTTGAGAAA AGGCCCGACG TGGAAGCGAG CAAGACCCGG GACATCCTCA TCTTCAATCA GCAGGACGAC CGGCGCGAGG CGCTCGAAAT CGCCCAGCAG CTGCGGCGCC GGGGATACAC CACCGCCCGC GACATCATAC GCAGAAATTT TGACGATTCG CTTGACTACG CGCGCCGCAT GAACATCCTT CACATGATGG TGGTCGGCGG CGATCAGTGC GGGCCGGACG AGGTCTACCT CGTTCGTGTT GCAGACGGAC AGGGACAACG GATAAAGAAG GCAGAGGTGT TCAGCGAACG GTTTTCGCTG GACGCCGGAC CTGACAAGGA GTCTTAA
|
Protein sequence | MTPITPIEAP LPKGVTDFLP EKADKIGYIE GKIRKVFELW GFRRIITPLL EFEDVIAAGL GDDLKAKTFR FDDRQSGKLI AVPSDITPQI ARIVATRLRG YPLPHRICYS GRVLRHAELQ SGRSREIFQS GVELIGLDSP EADAEMVTMA VEALKGLGFR DFKIDLGHVG FIRGIMTASG LEVAVRNRLQ EAIGKKDVSA VRSILAESPL SDAAKDELAA LPRLFGGREV LDEAGRVATN DTSRRALDNI SQVLDLLDIH GVSDHLTIDL GEVRGLDYHT GLTFEGFVTG MGEAVCSGGR YDTLTARYGF PAPATGFTFN VLALLSALEK RPDVEASKTR DILIFNQQDD RREALEIAQQ LRRRGYTTAR DIIRRNFDDS LDYARRMNIL HMMVVGGDQC GPDEVYLVRV ADGQGQRIKK AEVFSERFSL DAGPDKES
|
| |