| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3066 |
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| Symbol | ddl |
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| ID | 2686321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 3371784 |
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| End bp | 3372734 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637127759 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | NP_954108 |
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| Protein GI | 39998157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGAGGG ATGAGCTGAA AACCACGAAG ATAGGCGTAC TTATGGGAGG ACTCTCGGCT
GAGCGCGAAG TGTCCCTTGC CAGCGGCGGC GCTGTGCTGA AGGCCCTCCA GAGCCGGGGA
TATGACGCGG TCCCCGTGGA CGTCGGCCGG GATCTCCCGC AGGTTCTGGT CCGGGAGTGG
ATCGATGTTG CTTTTATCTG TCTCCACGGC CGCTACGGGG AAGACGGAAC CGTCCAGGGG
CTGCTGGAGC TCATGGGCAT TCCCTACACC GGATCGGGGG TCCTGGCCAG CGCCCTTGCC
ATGAACAAGA TCGTCGCCAA GGAGGTTTTC GCCGCGCGGG GGCTCACGAT CGCTCCCTAC
CGGGTTGTGC GCCGGGGCGA GACAGTTGAT CCCGTGGCGG AAGGGTTCGG CTACCCGGTG
GTGGTGAAGC CGTCTCAGGA AGGGTCATCG GTGGGGGTGA GCATCGTCAA GTCGCCGGAA
GAGCTCCCTT CTGCCCTGGA GCTCGCCTTC CGCTATGATG ACGATATCCT GGTGGAGCGC
TTCATCAAGG GGCGCGAGAT CCAGATCGGG ATACTGGACG ACCGGGCCAT GGGGGCCATC
GAGATCGTTC CCGTGAACGA GTTCTACGAC TTCGAGGCCA AGTATACCGC CGGCAAGGCC
GAGCATATCT GCCCACCGGT ACTCCCGGCG GAACTGCACC GCAGGCTCCT GGCCGAAGGG
GAAGCGGCTC ACCGCGCCCT GGGATGCTCC GGTTACAGCA GAGTCGATTT CCTCGTAACG
GAAGGGGGCG AGTGTTATCT CCTGGAGGTG AACACCCTGC CGGGAATGAC CGCGTTGAGC
CTTCTGCCCG AGATCGCCCT CAAGGAGTCC GGGATCGGTT TCGAGGACCT GGTGGAGAGA
ATTCTGATTT CCGCTGAGCT GAAAATCAAG GGGGAAGGGG CCGGAAGCTA G
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| Protein sequence | MTRDELKTTK IGVLMGGLSA EREVSLASGG AVLKALQSRG YDAVPVDVGR DLPQVLVREW
IDVAFICLHG RYGEDGTVQG LLELMGIPYT GSGVLASALA MNKIVAKEVF AARGLTIAPY
RVVRRGETVD PVAEGFGYPV VVKPSQEGSS VGVSIVKSPE ELPSALELAF RYDDDILVER
FIKGREIQIG ILDDRAMGAI EIVPVNEFYD FEAKYTAGKA EHICPPVLPA ELHRRLLAEG
EAAHRALGCS GYSRVDFLVT EGGECYLLEV NTLPGMTALS LLPEIALKES GIGFEDLVER
ILISAELKIK GEGAGS
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