| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU3031 |
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| Symbol | |
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| ID | 2688506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 3337484 |
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| End bp | 3339019 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637127724 |
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| Product | sigma-54 dependent transcriptional regulator |
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| Protein accession | NP_954073 |
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| Protein GI | 39998122 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACATTTA ATGCATACAT ACTATACATA AAATGCATGA CGCGTTTAAC AGCCATCCTG
CATTCCGAGC GTGAGTTTTT CAGCCGGGTC GCCCGGGCCG CCTTTCTCAA CCCCTTCAGC
GAAAGCCGGG ATGAGCTTGA CCAGTCCCTG GCCGGAAACG ATGTCGACCG CAAAGGCGCG
CTGGATGCCG CCATAGCCCG CGTGGCGGAC CGCTCCGCCG CCCTGCGGGA AGCCCTGAGC
GGCAGTCTGA CCCGCGTCCC AGTCTCAGAG AGGGAAACGA TACGAACGGT GCTCCTCTTT
GATCTGTACC ACCGTTTTCT CGACGATTTC GACCGGCTGA TCCGCGACCA GGCCGCGGCC
GGCGACACGC CCTGCCCCGT CCCCTTTGCC GGGAAATTCC AAGCCGCATT CGACGAGGCG
GGATTCCCGG GTGGTGAAAG TCGCCGCTAT CTTGCCCTCT TCTACCAGAT TCGCCGGGCC
TTTTACTTCA TCCGCGAGGG ACTTGCCGGC TCCAGCGCTT CCCTGCGGCG GGTGCGCGAA
CATCTCTGGC AGACCCTTTT CACCCACAAC ATCCGTTGGT TCGAGCAGCA TCTCTGGGAC
CGCATGGAGG ACTTTTCCGT TCTGATCCTC GGGGAGACCG GCACCGGCAA GGGCACAGCT
GCTGCGGCCA TCGGCCGTTC GGGGTTCATC CCCTTTGACC CGGGAAGCGG CCGGTTCAGC
GAGAGTTTCA CCCGCAACTT TCTGGCGGTG AACCTGTCCC AGTACCCGGA GGGAATTCTG
GAGTCAGAGC TCTTCGGCCA CCGGAAGGGA GCCTTTACCG GTGCCATTGA CCACCACGAG
GGTGTCTTCA GTCGTTGCAC TCCCCACGGC GCCATATTCC TGGACGAGAT AGGCGAGGTT
TCACTGCCGG TACAGGTAAA ACTTCTACAA GTGGTGCAAG AGCGGATTTT CTCCCCCGTG
GGAAGTCACC AGCGGCTCCG CTTCAGCGGA CGGCTCATCG CGGCCACCAA TCGAGACCTG
ACCCGCCTGC GCCAAGAGGG AGCGTTCAGG GATGACTTCT ACTACCGTCT TTGTTCGGAT
GTCATCACCA TTCCGCCTTT ACGGCAGCGG GTACGGGAGC GCCCCGAGGA ACTGAACGAG
CTCATCGCTG GCATCCTCCG CCGACTGGCG GGTGCTGCTC CGGACAAGGA GGTACAAGTG
CTGCGTCGGG CCATCGAGCG CGATGTGGGG AAAGAGTATC ACTGGCCGGG GAATGTGCGG
GAACTGGAGC AGGCGGTACG GCGGGTGCTG GTGACGGGAC ACTACCGGGG TGAGGCGAAA
CCGGAACCGG CCGGTGACTT GCCGCGGTAT CTCAAAGAGG CGGCAGAGAG GGAGTGTGAC
GCTCAGGAAC TGCTGGCAGG ATATTGTCGC CTGCTCTATG AACGCCACGG GACTTTCGAG
GAGGTGGCGA GGCGGGCCAA TCTCGACCGG AGAACCGTGA AAAAGTACCT GCAGCGGGAG
CAGTGCGCCC GCGGCGATAA TCGTGGCCGG CCCTAG
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| Protein sequence | MTFNAYILYI KCMTRLTAIL HSEREFFSRV ARAAFLNPFS ESRDELDQSL AGNDVDRKGA
LDAAIARVAD RSAALREALS GSLTRVPVSE RETIRTVLLF DLYHRFLDDF DRLIRDQAAA
GDTPCPVPFA GKFQAAFDEA GFPGGESRRY LALFYQIRRA FYFIREGLAG SSASLRRVRE
HLWQTLFTHN IRWFEQHLWD RMEDFSVLIL GETGTGKGTA AAAIGRSGFI PFDPGSGRFS
ESFTRNFLAV NLSQYPEGIL ESELFGHRKG AFTGAIDHHE GVFSRCTPHG AIFLDEIGEV
SLPVQVKLLQ VVQERIFSPV GSHQRLRFSG RLIAATNRDL TRLRQEGAFR DDFYYRLCSD
VITIPPLRQR VRERPEELNE LIAGILRRLA GAAPDKEVQV LRRAIERDVG KEYHWPGNVR
ELEQAVRRVL VTGHYRGEAK PEPAGDLPRY LKEAAERECD AQELLAGYCR LLYERHGTFE
EVARRANLDR RTVKKYLQRE QCARGDNRGR P
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