| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2670 |
|---|
| Symbol | |
|---|
| ID | 2687593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2944089 |
|---|
| End bp | 2945381 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637127360 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | NP_953715 |
|---|
| Protein GI | 39997764 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTTA CAGCATCACT TCCCTTTGTC GCCTTTGTCG TCTGGCTCCT TGCCCTCCCC
ATGGAGGGAT TCCTGCTGGC CCACGTCGGG TCGGGCAACG CTATCCTCTT TTTTCTCATT
CCCCACGTCG TTACGCTGGC AGTCATAGGC GCCGCTCTTC CGCGGCGGAT GCTGCCGCCC
CTGGCAGCCG TCGGCGGAGC AGCCGCCGCA GGCTCGACGC TGCTGATCGC CCAGGTCCCT
GCCGGAGTCC CCTGGTTTCT GGCCACGGCC GGCGTGGGAT CAGCTTTTGT TTGCGTCAAG
GCGGGCAGCA TCCTGAAGCG CTCTCCCACA GTAGCGGTAT CGGCTGCAGT CGGCCTGGCA
GCGGCCAATG TCCTGCTCTT CGTGTTCATG ATCGTTCCCG TGCCCCACAG CGTGAAATTC
CCGGCCGCGG CAGCCTTGCT TCTGGTTCCC ACGCTGGCAC GCACCGGGGC TCAGGACGAA
GCCGACGGGG AATCGAACCT GGCCCCCTTT CTCCCCTTCG TGTTCGTTTT TCAGATCGTA
AGTGGTCTCA TGTACGGGGC CCTGTACCAG GAATATGCCG AGGCAGCCTT TCTTCCCGGG
ATCGAACTCG CCTTTTACGT AGTAGCCGTC CTTGTGGGGC TTATGTTCCT GCGCCGCCGG
AGGGAGGGGC TTCTGGCCCT GGCTATCGTG ATGGCCATGT TCGCCTTTTC CCTCGTTCTG
ATAGACGGGG CGGCATCGGT TAACGTGGCC CTGTTCGCCA TGCAGGTGGC AGCGGGGTTC
CTCGATCTCT ACCTGCTGGC GCTGCTTCTT GCCCAGAGAA ACAGCTGCCG TGCCTTCGGC
ATCGGTCTTG CGGTCACCTG CGCCGGCATA GCTGCAGGCA AGACGGCCTC GCTCCTGATC
GGCGACGCCT CTCAACTGGT GGTGGCTGTA GCGAATCTCG TCCTCACTTC ATCGGTTCTT
GTTCTTTATC TGGTCATGCG AGGCGAACAG CACCTGGATG TGGCGGCCAT TCCGGCAATC
GGAGGCATGG CTGATCAGGC GGAAGCCGAG GCCGGCAACG CTGAGCCGAC CTTTGAGCTG
ATGCTTCCGC CGGGTCTGCG CAAGCGCTTC TCCGACCAGG AAAAGTCGGT CCTCGCCTGC
GTCGTCCGAG GGATGACGTT CAGGGAGGCA GCCCGGGAGC TGGGCATCTC CGAATCTTCG
GTCAAGACCT ACATGAAACG GATTTACGAT AAGATGAGCG TGTCAGGGAA AGAGGAATTG
CTGGCAAAGC TGGGGACTGA CCAAGGGGAG TAA
|
|---|
| Protein sequence | MTLTASLPFV AFVVWLLALP MEGFLLAHVG SGNAILFFLI PHVVTLAVIG AALPRRMLPP
LAAVGGAAAA GSTLLIAQVP AGVPWFLATA GVGSAFVCVK AGSILKRSPT VAVSAAVGLA
AANVLLFVFM IVPVPHSVKF PAAAALLLVP TLARTGAQDE ADGESNLAPF LPFVFVFQIV
SGLMYGALYQ EYAEAAFLPG IELAFYVVAV LVGLMFLRRR REGLLALAIV MAMFAFSLVL
IDGAASVNVA LFAMQVAAGF LDLYLLALLL AQRNSCRAFG IGLAVTCAGI AAGKTASLLI
GDASQLVVAV ANLVLTSSVL VLYLVMRGEQ HLDVAAIPAI GGMADQAEAE AGNAEPTFEL
MLPPGLRKRF SDQEKSVLAC VVRGMTFREA ARELGISESS VKTYMKRIYD KMSVSGKEEL
LAKLGTDQGE
|
|---|
| |