Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2649 |
Symbol | |
ID | 2687656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2919433 |
End bp | 2920242 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637127339 |
Product | amino acid ABC transporter, amino acid-binding protein |
Protein accession | NP_953694 |
Protein GI | 39997743 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTATCG CACCCACACC CCGCTTCAGG GCGGGGGGAT GGCTTATTGG ACTCTTCTTT GTCCTGTTCC TGAACGTGTC CCTTGCCCTC GCCGCGGGTG ACTCGCTTGT CGTCGGCATG GAACTGGCCT ATCCGCCGTT CGAGATGACC GACACGACCG GCAAGCCCAC CGGCGTGAGC GTCGACCTTG CCACGGAGCT CGGCAAGGCC CTGGGCAAGA AGATCGTGAT CCAGAACATG GCCTTCGACG GTCTGATCCC TGCCCTGAAA ACCGGCAAGA TCGACCTCAT CATCTCATCC ATGACCGCCA ATGCGGAGCG GGGCAAGTCC ATCGACTTCT CCGACCCCTA CCTGAACACG GGGCTCTGCC TCCTGGTCAA GAAGGAATCG CCGGCAAAGG GCATCGGCGA CCTGGACCAG CCGGGCCGCA GCGTCGCGGT CAAAAAGGGG ACCACGGGCC ACGCCTGGGC CAGCAAGAAC CTGAAGAAAG CCAGGGTACT CGTCCTCGAC AAAGAAGCCG CGGCCGTCCT CGAAGTGGTG CAGGGCAAAG CCGACGCCTT CATCTACGAC CAGATGTCCA CCTACCAGAA CTGGCAGAAG AACCGGGCCA CCACCCGCGC CATCCTGGAG CCGTTCCAGA AGGAATCGTG GGCGGTGGGC ATCCGCAAGG GCAACGATGA CCTGAGAAAG AAAGTGAACG CCTTCCTGGC CGATTTCCGC AAGAAAGGCG GCTTCGAGAC GCTTGGCGAC AAGTACCTCA AGGAGCAGAA GGAAGCGTTC AAGAAACTGG GCTATCCCTT CTATCTCTAG
|
Protein sequence | MVIAPTPRFR AGGWLIGLFF VLFLNVSLAL AAGDSLVVGM ELAYPPFEMT DTTGKPTGVS VDLATELGKA LGKKIVIQNM AFDGLIPALK TGKIDLIISS MTANAERGKS IDFSDPYLNT GLCLLVKKES PAKGIGDLDQ PGRSVAVKKG TTGHAWASKN LKKARVLVLD KEAAAVLEVV QGKADAFIYD QMSTYQNWQK NRATTRAILE PFQKESWAVG IRKGNDDLRK KVNAFLADFR KKGGFETLGD KYLKEQKEAF KKLGYPFYL
|
| |