Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2345 |
Symbol | |
ID | 2685715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2563583 |
End bp | 2564332 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637127036 |
Product | rsbU-related protein |
Protein accession | NP_953392 |
Protein GI | 39997441 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.442066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAC CGGCCAACGC GGCAGGGAAC GGAGTGGCCC TGGCGAGTCG CATCCAGCAG CTGCTCCTGC CGAAGACTCC GCCGGTCTGC AGCTGGGGAT GCATCGGAGT GATGAACCGG ATGGCGACCG CCCTGGGCGG CGACTATTTC GACTTCATCT CCATGCCCGA CGGCCGGGAG GTGGTGTTCA TCGGTGACGT GACCGGCCAC GACATCCAGT CGTCGGTGGT CATGTCGCTG GTCTACGGTT TCCTGCACCA CTGCGCGTTA ACTGTTGATG ATCCCCTCAC CATGGTATCG CAGTTGAACC GGTTTCTCGT CCGTTTTGCC GACCATGGCA CGGAATTGGA TCATCATTTT TCCTCCACTC TCTTCCTGGG GATCATCGAC CCGGCCTCCC TGCGCCTTGA GTACGTGAAC GCCGGTCACG TCCCGCCGCT GGTCCTGAGG CGGAACAGCC TTCACCGCCT TGCCTCCACG TCGCCACCGG TCGGCTTTTT TGCCGAGGCA GAGGTGGCGA CCGGCTGCTT CGGGCTGGAG CGGGGAGATC GCCTGCTCCT CTATACGGAC GGCATCCTCG ATGCGTCCAA CGGAACCGAG ACCTTCGGCG CCGAAAGGCT CGACGCGTTT CTTACCGCTA CGGGCGGAAG CTACACCCGG TTCATGGATG AGCTTGCCGC CGCGCTGCGG GACTTCGGGG CGGGCGACCC GCCCGATGAC GATTGCAGCG CCATCGTGAT CGACATTTGA
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Protein sequence | MSEPANAAGN GVALASRIQQ LLLPKTPPVC SWGCIGVMNR MATALGGDYF DFISMPDGRE VVFIGDVTGH DIQSSVVMSL VYGFLHHCAL TVDDPLTMVS QLNRFLVRFA DHGTELDHHF SSTLFLGIID PASLRLEYVN AGHVPPLVLR RNSLHRLAST SPPVGFFAEA EVATGCFGLE RGDRLLLYTD GILDASNGTE TFGAERLDAF LTATGGSYTR FMDELAAALR DFGAGDPPDD DCSAIVIDI
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