Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2122 |
Symbol | |
ID | 2687092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 2340674 |
End bp | 2342068 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637126814 |
Product | TraG family protein |
Protein accession | NP_953171 |
Protein GI | 39997220 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGT TCAAGAAGCG CATCATTAAT CCGGCCGGTG GCATGACAGA CATCGGCAAC GGTGTGAATC TGGACCGCCG TACAAAGATC GTTCCTATTG CCATCCCCGA TGCAGACAGG AAACGGCACA CTTTTGTCTT CGGAACCACA GGGGTCGGCA AAACCCGTCT GTGTGAAAAT CTGATCGAAC AGGACATCCG CAAGGGGTAT TCGGTGGTCT ATTTTGATCC CAAGGGTGAC CAGCAGATCT TCACCAAGAT TTACGAAGTG GCCAGAGATA GTGATCGCCT TGAAGAATTG ATGCTCGTCA CTCCCATTTT CCCGGAATAC TCAGCTGTGG TTGATCCCAT GGCCTTCTAT TTCATGCCGG ATGAACTGGT TGGACATATT GTTTCGGGCA TCATGGGCGG ACGCGAGCCG TTTTACCGGA ACATCGCCAA GGAGATCACC ACTGCCGTAA TCTCCGCCTA CATTATTCAG TCGAAACGAC ACGGCAACCT GCCCATCCTG AATATTGATG AAATACGGAA GCGCATACGC CGGGAGTCAC TCGACTCAAC CATGAAATCT CTCCGTAGCA TCGGTAATGC TGAAGCTGAC CTGACAGCTG GCATGATCGA GGACATCCTG AAATCCCCTA TGGAATATTA TGCCAAGGTC TCGTCAACGC TACGCACCGC CCTGATGGAA CTCTCGTCGG GCAATATTGG CAAGATCATC GGTCAGGCCG ACTCCAACCG TTTCATAAAG AATCTTGAGT CCGGCAAACC GGTCATCCTG GTAGTCCATA CCGGCGCCAT GATCACCCGC GAGGCCTCTG CTACCCTCGG CAAAGTCCTT CTCTCCATGA TTCAATCCTT TGTGGGACGG GTGTACCTCT CCAACCGCCA GAAGGTCAAT CCTCCGCTCT CCATCTTCAT CGATGAGGCG CAGAGCCTGC TTTACCAAGG CGTGGAGGAG CTGTTCGCCA AAGCTGGATC AGCCGATGTC ATGGTAACCG CTTTCGCTCA ATCGGTGAAC CAGGTCTATG CCGTCATCGG TGAAGAGTTC GGCAAGAGTA TCCTCGACAA CACCAACACC AAAATTTTCA TGCGCTGCTC CGATGCTGAG ACAAGCGATT ACGTGGTCAA GCATTTCGGC GTACAGAATG TGCTGACCGG GATATTCGGC TCGAATCAGG TTACGACCCG TGAGGTCGAA CAGGACATTC TGCGGGTTCA GGATGTCTTG AGCCTGAAGC CGCGGGAATT TTACATGATG ACCTACTCGG GACGCTTCAA GGGGACCACT AATGACGCCC ATGAACCCAA GATGAAGATC ATCTTTCCGG AAGCGCCGGC GGTTATCACC TCAAAGCTGT CTCAATCTAA GCCTGCAACG CCGCCCTCGC CATGA
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Protein sequence | MSLFKKRIIN PAGGMTDIGN GVNLDRRTKI VPIAIPDADR KRHTFVFGTT GVGKTRLCEN LIEQDIRKGY SVVYFDPKGD QQIFTKIYEV ARDSDRLEEL MLVTPIFPEY SAVVDPMAFY FMPDELVGHI VSGIMGGREP FYRNIAKEIT TAVISAYIIQ SKRHGNLPIL NIDEIRKRIR RESLDSTMKS LRSIGNAEAD LTAGMIEDIL KSPMEYYAKV SSTLRTALME LSSGNIGKII GQADSNRFIK NLESGKPVIL VVHTGAMITR EASATLGKVL LSMIQSFVGR VYLSNRQKVN PPLSIFIDEA QSLLYQGVEE LFAKAGSADV MVTAFAQSVN QVYAVIGEEF GKSILDNTNT KIFMRCSDAE TSDYVVKHFG VQNVLTGIFG SNQVTTREVE QDILRVQDVL SLKPREFYMM TYSGRFKGTT NDAHEPKMKI IFPEAPAVIT SKLSQSKPAT PPSP
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