Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2108 |
Symbol | |
ID | 2685971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2325896 |
End bp | 2329540 |
Gene Length | 3645 bp |
Protein Length | 1214 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637126799 |
Product | hypothetical protein |
Protein accession | NP_953157 |
Protein GI | 39997206 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGGA TTGCTGATGT CTTTGAAAGA CCCATCGATC GTACCATCGA AGAGGTCATC AAAGTTGACC AGGCGAACGA GGCTACTGTC CAAAATGAGC TCGAAGAGTA TATCGCGACG GATTCAATTA AGGACCAATT TGCCGAGGTT TACCGCGAGA TAGCTGCCGG TCCGTCTACA CCTCGAGAGG GGATTGGCGT ATGGGTTTCA GGTTTCTTCG GTTCAGGTAA ATCATCTTTC GCCAAGATCC TTGGCTACAC TGTCGCCCAG CAGAAGGTAG GCGCAACAAC TGCTACCGAG CTCTTCAAGA AAAGGCTGCG AGATGCCCGC GTCGTAGACC TGCTCGATCT CGTTACCATG CGAATCCCTT TCCATGCGGT CATTTTTGAC GTTTCCATGG ATCGCGGTGT GCGCGCCACC AATGACCGTC TCACAGAAAT CATGTATCGC GCGCTGCTCC GGGAGTTGGG TTATGCGGAA GACTTCGATC TGGCCGAACT GGAGATAACT TTGGAGGGAG ACGGTCGTCT CGAAGCTTTC GAACGGAAGT TCTTGGAATT GCACGGATCG GAGTGGAAGA AACGCCGCCA GCTGGGGCTG GCAATCAATG AGGCCGGTGC CGCGCTACAC GATCTCGACC CGAGAACCTA CCCTACTGCC GACTCGTATG CCCAGGGAAT CGGAGCCGGC CGGGCCGATG TCGACCCGAA CAAGCTGGCC CGTCGAGCCT TTGAATTGTG TGCGCGCCGC CATCCTGGCA AGGCCCTTAT CTTCATAATC GACGAGGTGG GACAGTATGT TTCTCGCAGT GTGGACAAGA TGCTCGATCT TCAGGCAATT ATCCAGGCAT TTGGCGTCGA AGGGAAAAAC CGGACCGAAC GCCAGGAGGC TGTTTCGCCA TTCTGGATCG TCGTCACTTC GCAGGAAAAG CTGAACGAAG TGGTCACGGC CCTCGACTCC AAAAAAATCG AGTTGGCGCG TCTCCAGGAC CGTTTCCGTA TCACGGTGGA TCTCAAGCAA TCCGACATAA CCGAAGTCAC CAGCGAACGT GTCTTGAAGA AAAAGGCCGG AGCGGTGGAC CTCATCGGTA AACGTTTCGA TGCCGATGAA CCCAGAATCA AGCAGTGCTG CACTCTGGAA CGCACCCATC GGAACCTGGA AATCAATCGA TCATCCTTTG TCAGGCTCTA TCCTTATCTG CCCTACCAGA TCGATCTATG TATCGACATC GTTGCCGGGT TGCGCCTCAA GCGGGGCGCC CATCGGCACG TCGGCGGCAG CAACCGGACG ATCATCAAGC AGGCCCAGCA GATGATGATC AATGACCGCA CGCGCCTGGC CGAGCAGCCC ATCGGTACGC TCGTCACGCT GGACAAGGTC TATGAACTGC TGGAGGTCGG CAATCTGCTC CCCACCGAGG TCTCCCGCGA GGTGGCCAAC GTTGCCCAGC GATTGCCGGG TAACCCGCTT GCCCATAAGG TCGTGAAGGC GATCGCACTC CTTGAGTCCG TCAAGGACCT GCCAAGGACT CCCCATAACA TCGCGGTTGT GCTCCATCCG TCCATAGAAG CAAACCCACT GACCAAAGAC GTGGTGGCTG CCCTCAAGGA GCTTGAAGAA GCGCAGTTTA TCCGCCAATC CGAGGAAGGG TACAAACTTC TCACCGTTCA GGAGAAGAAC TGGGAAACGC AACGCAACGG GCGCGACCCT CGTGAGGCCG ATCGCAACCG AATTCATCGA GAGTTGATTC GCGAGATTTT TTCTGAGCCG AAACTGCGTA CCTACCGCTA CAAGGACCTC CGTGGCTTCC GCACCAGCTT ACTTGTCAAT GGCGAGTGGG TGGAGTCAGA GGGGGAAATT CCGCTCAACA TCCTCCTTAC GGCCAGGGAG GAGCATCAGG ATACCCTGGT CGACGCCCGC GAGGCGAGCG TCTCCAAAAC AACTGAGCTG TTCTGGGTGG CAACGCTCAC CGACGAAATC AACTCCCTCG TAACTGAGCT CTTCCGTTCG CGAGAGATGA TCGGGGAATA TGACCGGCTC GCAGCACAGC AGCGTCTGAC GGTTGAGGAG ACCGGCTGTC TCGCTGATGA AAAAAGCCGG CGCGATCGTA CCCAAAGAAA TCTTCGCTCC AAGCTTCTCG CCTGCATCGA GGGGGGGAAC GCCTTCTTCA GCGGAGTCAG CTACGACGCC CCGGTACTCG GTTCGTCCCT TTCCGAGTCC CTTGGTACGC TGCTTGAGAG GGCGGTACCG GTCCTCTACC CGAAACTGGA GGTCGGGGTG CTCAGGCTCA ACGGCGATGA GCCGGTGAAG TTTCTCACTT CAGCTAACCT CAACGGCCTT CCTCAGATCT TCTACCACGA CAAGGCCGAG CGGAGCCTCG TCATAAAGCA GGCCGACCGC TTTGTGCCTA ACCTTGGCTG CGAGCTCTGT CGGGAACTTC TCGACTACCT GAAGCGTGAA CATGCATACG GCAACCGGAT AACCGGAAAA ATGCTGGAGT CCCACTTCAG CGGCCTCGGC TACGCCTGGG AGCGGGAGTC CATCCGCCTG GGACTTGCCA TCCTTTTCCG CGGCGGCGCC ATAGAGGTTA CCCATCAGGG ACGCAAATAC CGTAACTATA CCGAGCCGAC CTCGCGAGTC CCGTTCGTGA ACAATCCTGC GTTTCGGTCT GCTTCTTTTT CACCGCGTGA GGCGCTCGAT CTCAAAGTCC TAGCCAATGC AGCGCGGATG TATGAAGAAA TCTCCGGTAG GGATGTGGAT ATCGAGGAGG GGGCGATTGC CCAGGCATTC AAGCAGATTG TAGTTTCCGA CCGCGAAAAG CTCCTCCCTC TGGCCGCCCG CCTGGGCGCT CTCAGTTTGC CCGGTGCCAA GATTGTGCAG GAACAGCTTA ATTGGGTCGA GGGTATTCTG GAGATGCCCG CCGATGACTG CGTGAAAACC CTGGCAGGCG ATGGCAAGGC TTATCTTGAG GGGCGTCGGC AGTCTTTTGC ATTGGATAAA GCGGCCACCG ATGAAAATAT CCAGGCCATA GCACGAGCCC GACGGGTTTT GATGGAACAA TGGCCTGTTC TCGTCCTGAA TAATGACGAT CCAGAGCTGA AGGATGCGGC CGAAAAACTG GGTGAGACGT TACAGTCGGA AGATGCCCTT GCCCGGATCG ATAACCTCCG CTTTTACAGT GAATCTCTCA GCAATGCCTA CCGAACGTTG TACGAGAACC TGTTTGAAAA GCGCAAAGCT GCCTACACAG CAGCTCTTGA CCAGATCAAG GGGCGTCCCG AATGGCTCGC CGTTGCCGAA GACCCCGATA TCGCACAGGA ACAGCTGGAC CTTATTCTCC AGCCGCTGAC CCTGAAGGCT GAGGCTGTTC TCGACCTTCC CCATGGGGCT ACGGTATGTC AACGGACCGG CGCCACCCTG GCCCAGCTGG AGAGCGACCT GGCTGCGGTG GAGGCAGTCG GCAGAGACGT GCTTCGTCGC ATCCTGGAAC TGGCTGCTCC GGAAGAAAAG ATTGAGCGGG TCGCGGTGGC CAGGCTTTAT CCCGGTCGCA TCACCAGCAA GGATGAGTTG GAGGATTTCA TCACTAACCT GCGGGAGCGC CTTTCCAAAG TCCTCGCCCA GGGCGGAACC ATAATCCTGG AGTGA
|
Protein sequence | MNRIADVFER PIDRTIEEVI KVDQANEATV QNELEEYIAT DSIKDQFAEV YREIAAGPST PREGIGVWVS GFFGSGKSSF AKILGYTVAQ QKVGATTATE LFKKRLRDAR VVDLLDLVTM RIPFHAVIFD VSMDRGVRAT NDRLTEIMYR ALLRELGYAE DFDLAELEIT LEGDGRLEAF ERKFLELHGS EWKKRRQLGL AINEAGAALH DLDPRTYPTA DSYAQGIGAG RADVDPNKLA RRAFELCARR HPGKALIFII DEVGQYVSRS VDKMLDLQAI IQAFGVEGKN RTERQEAVSP FWIVVTSQEK LNEVVTALDS KKIELARLQD RFRITVDLKQ SDITEVTSER VLKKKAGAVD LIGKRFDADE PRIKQCCTLE RTHRNLEINR SSFVRLYPYL PYQIDLCIDI VAGLRLKRGA HRHVGGSNRT IIKQAQQMMI NDRTRLAEQP IGTLVTLDKV YELLEVGNLL PTEVSREVAN VAQRLPGNPL AHKVVKAIAL LESVKDLPRT PHNIAVVLHP SIEANPLTKD VVAALKELEE AQFIRQSEEG YKLLTVQEKN WETQRNGRDP READRNRIHR ELIREIFSEP KLRTYRYKDL RGFRTSLLVN GEWVESEGEI PLNILLTARE EHQDTLVDAR EASVSKTTEL FWVATLTDEI NSLVTELFRS REMIGEYDRL AAQQRLTVEE TGCLADEKSR RDRTQRNLRS KLLACIEGGN AFFSGVSYDA PVLGSSLSES LGTLLERAVP VLYPKLEVGV LRLNGDEPVK FLTSANLNGL PQIFYHDKAE RSLVIKQADR FVPNLGCELC RELLDYLKRE HAYGNRITGK MLESHFSGLG YAWERESIRL GLAILFRGGA IEVTHQGRKY RNYTEPTSRV PFVNNPAFRS ASFSPREALD LKVLANAARM YEEISGRDVD IEEGAIAQAF KQIVVSDREK LLPLAARLGA LSLPGAKIVQ EQLNWVEGIL EMPADDCVKT LAGDGKAYLE GRRQSFALDK AATDENIQAI ARARRVLMEQ WPVLVLNNDD PELKDAAEKL GETLQSEDAL ARIDNLRFYS ESLSNAYRTL YENLFEKRKA AYTAALDQIK GRPEWLAVAE DPDIAQEQLD LILQPLTLKA EAVLDLPHGA TVCQRTGATL AQLESDLAAV EAVGRDVLRR ILELAAPEEK IERVAVARLY PGRITSKDEL EDFITNLRER LSKVLAQGGT IILE
|
| |