| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1778 |
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| Symbol | |
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| ID | 2686519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1940793 |
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| End bp | 1943261 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637126458 |
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| Product | type II secretion system protein, putative |
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| Protein accession | NP_952828 |
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| Protein GI | 39996877 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0505418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACCA TAGCGAACAT GGCCATTGCC GCGGTAGTAC TGACTTTTCT CGCCGGGTGC
ACTGCCGGCC TGACCGCGTT CAACAAGGCT GAAAAGCTTG AAGAGGAAGG TAAGCTTGAC
GAGGCGGTCA TGAAGTTTGC CGAGGCTGCT TCAACCAATC CTCAACAGAC CGAGTACCGC
ATGAGACTCC TCAAGGCGAG CGAAAAAGCC GCGTTCGAGC ACCTCAAAAA TGGGGATACG
GCCTATGAGC AGCAGCTGCT AGACGAAGCT CTGCGGGAAT ATCAGTCGGC AGTTTCGCTC
AACCCTGCTC TGGCGCGGGC AAAGCAGCGC AGCGACGAGT TGATCCGGGT GCGTAATTCA
CTGACCTACT ATCGCGAAGG ACTCGAGTTT GAAAAATCGA ACAAGCCTCG CGAAGCCCTT
CAGGCCTATC GCAAGGCTCT GGATCTCAAT CCCGGGAACA AGGAAATAAA AGAAGCCCTT
GAAAAGCTGC TCCAGACCAG ACGCACCAAG CTGGAAGGCT TTGAACTCAA TCTCAAATCG
ACCAAGCCGA TAACCCTTAA GTTCAAGGAA GCTAAGCTCA AGGACGTTTT CTATATTCTG
TCCCAACTTT CAGGGATTAA TTTCATCTTT GACGAGGGCG TTAAGGAACA AAACGTCACC
GTTTTCCTTG AAAATGCAAC TTTCAATCAA GCTCTCGATC TACTTACGAG CATGAACAAG
CTGGGACGCA AAGTCCTCAA TGAGAGCACT ATTCTCATTT TCCCCAAGAC ACCGGAAAAG
GCCAAACAGT ATGAAGATCT GATGGTGAAG ACGTTCTATC TGAACAGCCT TGATGCCAAG
AAGGCCGTCA ACCTTTTGCG GACGATGCTT CAGGTCAAGA AGATCTACGT GAACGAGGAA
CTGAATGCCC TCGTCATCAG GGATAACCCG GAACTGATCG ATGTGGCGGG GAAGATTCTC
GAAGCCAACG ATGTGCCCGA TGCCGAAGTG TTGCTGGAAG TTGAGGTTAT TCAGGTTTCG
AAAAACAATT CAGAGTTGTT CGGCCTGGGA CTGAGCCGGT ATGCCGTATC CCTCAACGCC
CGCACTCCCG GGTCGGGTGG CGATTTCTTT TCTGATACCT TTGATCCGAA GGTAACCACA
ACGTCGAACG ATACGACCAC GGTGACCACT ACCCAGGTGA AGAACCTCCT CAATCTCTTC
AACTGGAATG GTTACCAGGG GTTCCTGACC GTTCCCAGCG CCACGTACAA TTTCAGCAAA
CAGTTGTCCA ACGCTGAGGT CCTGTCGAAT CCGAAGATTC GCGTCAAAAA CCGGGAAAAG
TCCAAGTTTA CCGTGGGCAC GAGGGTGCCT ATCACCACTA CGTCCAGTAC CGGTTCCGTC
GGCGGGGTTA CCGTGAACGT CCAGTACGTG GACGTCGGGG TCAAACTCAA TGCGGAGCCG
GTGATTCAGT TGAACAACGA GGTCACCATA AAGCTTGGGG TCGAGGTCAG TTCCATTATC
GGCGAGAAGA CAGTCGGCAG CGGCGATGCC ATTAGTTCGG TCGTGACCAT CGGCACCCGC
AACGTGGATA CGGTTCTCAA CTTGAAAGAC GGGGAAACCA GCATCATCGG CGGTCTCATC
GAGGACACAA AAAGCAAGAG CAAGCAGAAG ATCTGGCTCC TGGGCGATAT TCCCCTCATT
GGCAGCCTGC TGTCCAGCCA CAATGACAGG TATGATAAGA GTGAGCTGGT GCTTGCCATT
ACGCCGCGCA TTGTCCGGGC AGTATCCGTC CCCGAGGCTG ATGTAGCGGC CTTCTGGTCG
GGCAAGGAAG ATGACCCGAC AGCCGTTAAG CCGTTTTCTT CCTTTGAACT GGAACCCGAC
TTCGCAGCCC AACCGGCCGG CGCGCCGGCC AAAGGCGCGC CCGCAGTGCC TTCGGCCAAG
CCCGGCAGCG CGGCTCCTGC CGGGCAGCCG GCGACAGCGG CCGACGCACC GGCCGCTGTG
GTGCAACCGG CTGCGACACC GGCTGCCGCA TCAGCAGCAG GAGTTCAAGC TAGCGTGGCA
CCTGTTCAGC CCGCCATGCG CGGAAGCCTC AATATCGCCG CACCGGCCGG CGTTGATCTT
GGCGGTCAGT TCAAGGTTGA AGTCAAGGTG ACTGACGTCA AAGGGCTTGC CAAGGCACCG
TTCACTCTGC TCTATGACCC CATTTTCATC GAGTATGTCG GGGCGGCGGA AGGGAACTTT
CTAAATCGGG ATGGCAAGCC GACGATCTTC AACGCACTGG CGGACAAAGC GGCTGGGCGA
GTAGTCATCA CGATGGATCG CAGTGCTGCC GGTGAGGGGG TCGACGGCTC GGGAACGCTC
CTAAGTGCCA CCTTCAAGGC AAAAAACAAG GGACCGGCCA GCCTCGGCCT CCAGAATGTA
AAGTTCGTTG ACCAAGCGAA CAGGCCTCTG GATATAATTC CTTACAACAC GGTGGTTGAA
GTCAAGTAG
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| Protein sequence | MRTIANMAIA AVVLTFLAGC TAGLTAFNKA EKLEEEGKLD EAVMKFAEAA STNPQQTEYR
MRLLKASEKA AFEHLKNGDT AYEQQLLDEA LREYQSAVSL NPALARAKQR SDELIRVRNS
LTYYREGLEF EKSNKPREAL QAYRKALDLN PGNKEIKEAL EKLLQTRRTK LEGFELNLKS
TKPITLKFKE AKLKDVFYIL SQLSGINFIF DEGVKEQNVT VFLENATFNQ ALDLLTSMNK
LGRKVLNEST ILIFPKTPEK AKQYEDLMVK TFYLNSLDAK KAVNLLRTML QVKKIYVNEE
LNALVIRDNP ELIDVAGKIL EANDVPDAEV LLEVEVIQVS KNNSELFGLG LSRYAVSLNA
RTPGSGGDFF SDTFDPKVTT TSNDTTTVTT TQVKNLLNLF NWNGYQGFLT VPSATYNFSK
QLSNAEVLSN PKIRVKNREK SKFTVGTRVP ITTTSSTGSV GGVTVNVQYV DVGVKLNAEP
VIQLNNEVTI KLGVEVSSII GEKTVGSGDA ISSVVTIGTR NVDTVLNLKD GETSIIGGLI
EDTKSKSKQK IWLLGDIPLI GSLLSSHNDR YDKSELVLAI TPRIVRAVSV PEADVAAFWS
GKEDDPTAVK PFSSFELEPD FAAQPAGAPA KGAPAVPSAK PGSAAPAGQP ATAADAPAAV
VQPAATPAAA SAAGVQASVA PVQPAMRGSL NIAAPAGVDL GGQFKVEVKV TDVKGLAKAP
FTLLYDPIFI EYVGAAEGNF LNRDGKPTIF NALADKAAGR VVITMDRSAA GEGVDGSGTL
LSATFKAKNK GPASLGLQNV KFVDQANRPL DIIPYNTVVE VK
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