Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1733 |
Symbol | livH |
ID | 2685356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 1898032 |
End bp | 1898916 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637126413 |
Product | branched-chain amino acid ABC transporter, permease protein |
Protein accession | NP_952783 |
Protein GI | 39996832 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.293981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAG GCCAGCAGAT AGCGCAATAT CTTCTCTCCG GACTTTCGAC GGGAGCCATC TATTCCCTGA TCGGGGTCGG GTTTGCCATC ATTCACAATG CCACAGGCAT TATCAATTTC GCCCAAGGCG AACTCGTGAT GCTTGGCGGC ATGTTCACGC TCTTTTTTCT GACAGCCCTG AATCTGCCGC TGCTGGTAGC CATAATCCTG GCAATCGGCG CCACCACCCT CGTGGGCGTA GTGTTCGAAC GTCTCGCCAT CCGTCCCATG AAGAATGCCT CGCCTATCAG CCTCGTCATC ATCACGATCG GCGGCAGCAT TCTCATCCGC GGCATTGCCA TGATCGTCTG GGGCAAGGAC ACTCACGCCA TTCCCACATT CTCGGGCAAT GAGCCGATCC ATCTGGGCGA GGCAACCATC CTTCCACAGC ACCTCTGGAT ATTTGCGGTG ACCATTGTGG TCATGATCTG CAGCAAACTC TACTTCAACT ACACCATCAG CGGCAAGGCC ATGCGTGCCT GCGCCTACAA CCGTCGGGCC GCCGGTCTCG TGGGGATCGA CGTGCGGCGC ATGGTGCTTT TTTCCTTTGC CATCAGCTCT GCCATGGGTT CCCTGGCCGG TATCATCATC GCTCCGCTCA CCATGACCTC CTATGATGTT GGCATCATGC TCGGCCTCAA AGGATTCTGC GCCGCCATCA TCGGCGGCAT GAGCAGCGGC CTCGGCACCA TCCTGGGCGG CATTCTCCTC GGCATCCTGG AATCGCTTGG CGCTGGACTT TTCTCATCCG GCTATAAGGA CGCCATTGCC TTTATCATCC TGTTGCTGAT TCTCTTTGTA CGTCCCCAGG GATTGTTCCG CAAGGGCGAG ACCGAGCGTG TCTAA
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Protein sequence | MNLGQQIAQY LLSGLSTGAI YSLIGVGFAI IHNATGIINF AQGELVMLGG MFTLFFLTAL NLPLLVAIIL AIGATTLVGV VFERLAIRPM KNASPISLVI ITIGGSILIR GIAMIVWGKD THAIPTFSGN EPIHLGEATI LPQHLWIFAV TIVVMICSKL YFNYTISGKA MRACAYNRRA AGLVGIDVRR MVLFSFAISS AMGSLAGIII APLTMTSYDV GIMLGLKGFC AAIIGGMSSG LGTILGGILL GILESLGAGL FSSGYKDAIA FIILLLILFV RPQGLFRKGE TERV
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