Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1706 |
Symbol | panC |
ID | 2685348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1869693 |
End bp | 1870544 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637126387 |
Product | pantoate--beta-alanine ligase |
Protein accession | NP_952757 |
Protein GI | 39996806 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.260086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCA TAGATTCTGT TGCCGACATG CAGGCATTTT CCCGCGATGC CAGGCGTTCG GGGAAAACCA TTGCCTTGGT CCCCACCATG GGCTATCTCC ACGACGGACA CGCCTCGCTC ATGCGCGAGG GGCGCACCCG GGCGGACATC CTGGTGGTGA GCATTTTTGT CAACCCGACC CAGTTCGGCC CCAACGAGGA TTTCACCACG TACCCACGCG ACCTGGAGCG AGACCTGCAG GTTGCCGAAG CAGCCGGGGC GGACGTGATC TTCGCCCCCC GGGCCGATGA CATGTATCCT GCCGGATTCC AGACCTATGT CGATGTGGAA AAGGTGACGC TTCCTCTCTG CGGAGCGAGC CGGCCTGGAC ATTTCCGCGG AGTAACCACC GTTGTGGCCA AGCTCTTCAA TATCGTCATG CCCCACACGG CGTTTTTCGG CAAGAAGGAC TTCCAGCAAC TGGCCGTAAT CCGTCGGATG GTTGCGGATC TGAACATGGA TCTGAGCATC GTGGGCATGC CCATTATCCG CGAGCCGGAC GGATTGGCAA TGAGCTCCCG CAACGCCTAC CTGGGGCCGC AGGAGCGCAC TAACGCCCTC TGCCTCAATC GGTCCCTTGC CGCCGCACGA ACCCTGTTCA CCGATGGTGA GCGAAGCGTC GCACGCCTGC GCGACACGGT GTTGCGGATA CTTACCGAAG TGCCCGGCGC CGCCATCGAC TATGCTGATT TCCGTGACAG CGAAACACTT GAGCCGGTGG AAGCGGCCAA TGAAAAGACT CTCCTCGCCC TGGCCGTCAA GATAGGAACA ACGAGGCTGA TCGACAACTG CGTCCTGGGT GAGGAGCAGT AG
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Protein sequence | MRIIDSVADM QAFSRDARRS GKTIALVPTM GYLHDGHASL MREGRTRADI LVVSIFVNPT QFGPNEDFTT YPRDLERDLQ VAEAAGADVI FAPRADDMYP AGFQTYVDVE KVTLPLCGAS RPGHFRGVTT VVAKLFNIVM PHTAFFGKKD FQQLAVIRRM VADLNMDLSI VGMPIIREPD GLAMSSRNAY LGPQERTNAL CLNRSLAAAR TLFTDGERSV ARLRDTVLRI LTEVPGAAID YADFRDSETL EPVEAANEKT LLALAVKIGT TRLIDNCVLG EEQ
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