Gene GSU1617 details

Gene Information

• Locus tag: GSU1617
• Symbol: lexA-2
• ID: 2685264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 1770881
• End bp: 1771492
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637126297
• Product: LexA repressor
• Protein accession: NP_952668
• Protein GI: 39996717
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAACAC TTACCTCTCG CCAGCGCACG GTGCTTGAGT TCATAACCGC CCACGTGGAT 
CGCCACGGCT ATCCTCCTAC CATGCGGGAA ATAGCCCGCC ACCTGAACGT GAACGGCACA 
CTGGGCGTTG CAAAACACCT TGAGGCTCTT GCCCGGAAAG GCTATCTCCA GCGGGAACCG 
GGGAACTCGC GCGGCATAAC TCTGACTGGG CAGACACGGC ACACCCCTAC CGTTTCGTTA 
CCCGTGATCG GAGTCGTGCG GGCCGGGGTT CCCCAGATCG CCACAGAGGA AATCGAGGAG 
CACATATCGA TTGATCAATC CCTGGTCAAA GGAGGTGCCT TTTTTCTCAG AGTCAAGGGT 
GACTCCATGA TCAACGCCGC GATCATCGAA GGGGACCTGG CCCTGGTCCG CCCCCAGCAA 
ACAGCGGAAA ACCGCGACAT CGTGGTAGCC ATGATCGACG GCGAAGCAAC ACTCAAACGT 
TTCTACCAAG GAGCGGACCA TATCCGGCTT CAGCCCGAAA ATCCCAATAT GGCCCCCATC 
ATAGTTCGGA GCGGGGTACA GGAGGCATGG ATAATCGGCA AAGTTGTGGG TATTTACCGG 
CGTATGGATT AA 

 

Protein sequence

METLTSRQRT VLEFITAHVD RHGYPPTMRE IARHLNVNGT LGVAKHLEAL ARKGYLQREP 
GNSRGITLTG QTRHTPTVSL PVIGVVRAGV PQIATEEIEE HISIDQSLVK GGAFFLRVKG 
DSMINAAIIE GDLALVRPQQ TAENRDIVVA MIDGEATLKR FYQGADHIRL QPENPNMAPI 
IVRSGVQEAW IIGKVVGIYR RMD