| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1591 |
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| Symbol | truB |
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| ID | 2687358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 1744474 |
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| End bp | 1745388 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637126271 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | NP_952642 |
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| Protein GI | 39996691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00165016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACGGCT TTATCGTCAT CGACAAACCG ATCGGTCTCA CCTCCCATGA TGTGGTTGCG
AGAGTCAGGC AAACCCTTCG GCAGAAGAAG GCCGGTCACA CCGGCACGCT TGATCCATTC
GCCACCGGCG TTCTACCGGT TGCTGTCGGC GAGGGGACAA AAGCGATTCC CTATCTGGAT
GAATCAACCA AAGTATACCG TGCCACGCTG ATCCTTGGCG CTGCCACTGA TACCCAGGAC
CACACCGGTC AGGTTGTTCA TGCCGGCGAC TGGCGGCACC TGGAGCCTCA GTCAGTTCGT
GATGTCGTTT CCTCGTTCAC GGGCAAACTC AGCCAGCTGC CCCCCATGTT TTCGGCCCTC
AAGCGTGATG GCGTCCCCCT TTACAAACTC GCCCGCACTG GCAGGGAAGT CGAGCGCGAA
CGCCGTGAGA TAGAGGTTTT CTCATTGGTT GTCGACTCGA TTGATCTGCC GTTGGTGACG
TTTACCCTGT CCTGCTCGCG CGGGACCTAT GTCCGGACAC TGGCCCACGA CATGGGTGAG
CGTCTTGGCT GCGGTGCTCA CCTGACGGAG TTGCGCCGGT TGAGCAGCGG CCCCTTCAAT
CTGGACCGGG CTATATCCCT TGAACGGCTT AAAGAGCTGG CAGAAGCCGG CAACCTTGCC
GATGTCCTTG TGTCGCCATC CGACGCCCTG GGTCATCTTC ATGCATTGCC GCTCACCGCC
CAGGGAGCTG AACGTGTCAG GCGCGGCATG CCCCCTTGCC GTGAGGATGT TGAGCATGGG
GCGGGTACGG GAATACCGGC GGGGACACGT CTGCGTTTGC TGAGAGACGG AATTGTTGTT
GCTGTGGCGG ATTCTCTTGC CGGTCTTTGG TCCAGTGATA CCAAAAACCT AAGACTTTTA
AGGGTGTTTA ACTAG
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| Protein sequence | MDGFIVIDKP IGLTSHDVVA RVRQTLRQKK AGHTGTLDPF ATGVLPVAVG EGTKAIPYLD
ESTKVYRATL ILGAATDTQD HTGQVVHAGD WRHLEPQSVR DVVSSFTGKL SQLPPMFSAL
KRDGVPLYKL ARTGREVERE RREIEVFSLV VDSIDLPLVT FTLSCSRGTY VRTLAHDMGE
RLGCGAHLTE LRRLSSGPFN LDRAISLERL KELAEAGNLA DVLVSPSDAL GHLHALPLTA
QGAERVRRGM PPCREDVEHG AGTGIPAGTR LRLLRDGIVV AVADSLAGLW SSDTKNLRLL
RVFN
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